chore: update dependencies with compatibility fixes

- Update all packages to latest versions via pnpm update --latest
- Downgrade Prisma 7 to 6 (v7 requires schema migration)
- Downgrade Tailwind CSS 4 to 3 (v4 requires PostCSS migration)
- Downgrade Storybook 10 to 8 (addons not available in v10)
- Pin cheerio to 1.0.0-rc.12 via pnpm override (type exports changed)
- Fix AI SDK tool definitions: parameters -> inputSchema
- Fix cheerio types in extract-meta and table-extract tools
- Add explicit type annotations to tool execute functions
- Migrate biome config to v2.3.11 schema

All type-checks, tests, and builds pass.

packages/npm-client/package.json

@@ -18,11 +18,11 @@
     "type-check": "tsc --noEmit"
   },
   "dependencies": {
-    "zod": "^4.1.13"
+    "zod": "^4.3.5"
   },
   "devDependencies": {
     "@tpmjs/tsconfig": "workspace:*",
-    "@types/node": "^22.10.2",
+    "@types/node": "^25.0.3",
     "typescript": "^5.9.3"
   }
 }