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f0e6baf907
ticket #000031 Phase 2: warrant resolver + 18 derivations rows landed
Closes the warrant-promotion data path: claim-pack records now
bind to surface-ingested textbook chunks via Merkle inclusion
proofs in the existing `derivations` table.

What landed
===========
arborist/qa/warrant_resolver.py — four pure-data steps + one DB
write:

1. parse_citation(s) — regex pipeline turning the claim-pack
   `source_reference` string into structured Citation tuples.
   Handles "Title by Author" (single + Oxford-comma multi +
   et-al), semicolon-separated multi-cite ("Knuth §1.2.6;
   Stanley §1.2; Brualdi §3.5"), and compact author-year
   ("Pascal 1654") forms.

2. resolve_chunks(c, shards_dir) — FTS5 search across sibling
   crawl/ dir's textbook-surface shards. Skips the main numbered
   shards (Wikipedia content; would be false positives). Per-
   shard match filter requires BOTH author last name AND a title
   token in the shard's title-haystack — honest "no match" for
   textbooks not yet surface-ingested.

3. compute_proof(shard, doc_root, chunk_id) — reads
   merkle_nodes, walks layer-by-layer to assemble siblings;
   emits deterministic JSON proof_blob compatible with
   arborist/merkle.py verification.

4. write_derivation(...) — INSERT OR IGNORE into the existing
   derivations table with process_id="warrant-resolver-v1".
   Idempotent at the database layer.

CLI surface
===========
- `arborist warrant-status --shards-dir ...` (read-only) —
  emits per-record JSON: parsed citations, FTS5 candidates,
  whether a derivations row exists.
- `arborist warrant-resolve --shards-dir ... [--write]` —
  default dry-run summary; --write actually computes proofs
  and inserts rows.

End-to-end verification
=======================
Real-shard run: `arborist warrant-resolve --shards-dir
~/.arborist/shards --write` →

  records_total: 92
  records_resolved: 18
  derivations_written: 18

All 18 are pillar-IV Hilbert axioms citing "The Foundations of
Geometry by David Hilbert" — the only cited textbook fully
surface-ingested by Phase 1. The remaining 74 records cite
textbooks not in our shard cluster (Mendelson, Enderton,
Jech, Goldstein, Barendregt, Stanley, Brualdi, Knuth, …) and
correctly produce 0 matches; they stay at ANCHOR-WARRANTED
until those textbooks land via future Phase-1 manifest
expansions.

Re-running the writer is a no-op (PK collision on (core_root,
src_root, process_id) = INSERT OR IGNORE).

Drive-by fix
============
arborist/sources/textbook_tex.py — _extract_title now also
parses PG's plain-text `Author:` line and appends "by Author"
to the title, so the warrant resolver's author-last-name match
works against PG-ingested textbooks (Hilbert "The Foundations
of Geometry by David Hilbert" instead of just "The Foundations
of Geometry").

Test suite
==========
tests/test_warrant_resolver.py — 14 unit tests for the citation
parser (no DB / network). Full suite: 1588 passed / 28 skipped.

Phase 3 (verifier wiring)
=========================
NOT in this commit. The data substrate is in place; the
audit_mode upgrade path that lifts answers citing
claim-pack-records-with-derivations from ANCHOR-WARRANTED to
EVIDENCE-WARRANTED requires a verifier change — touches well-
tested code, worth its own ticket so the regression risk is
bounded.
2026-05-09 17:35:39 -04:00
514e07d7c2
textbooks: TeX-source ingest closes pillars I + IV (Hilbert + Boole)
Two foundational PD textbooks ship from Project Gutenberg as
LaTeX source only — no clean HTML edition. Pandoc fails on PG's
custom preamble macros; a focused regex-based stripper is the
right amount of machinery for the well-known PG TeX format.

What landed
===========
- arborist/sources/textbook_tex.py — TextbookTexSource +
  strip_tex pipeline. Drops preamble + line comments + structural
  envs (tabular, figure, thebibliography, scshape, …); keeps the
  argument of structural-but-content-bearing single-arg commands
  (textbf, emph, section, chapter, paragraph, PG's custom \\rfa);
  drops zero-arg + brace-arg structural commands (noindent,
  thispagestyle, setcounter, label, index, …); substitutes
  symbol-level macros (\\to → →, \\neg → ¬, \\forall → ∀, \\S → §,
  Greek letters, etc.).

- arborist/cli.py — `--source textbook_tex` accepts --url,
  --bundle, or --urls-from. Reuses the existing fetch + chunker
  + Merkle commit + audit pipeline; idempotent at the database
  layer (same TeX → same prose → same document_root).

- bench/scripts/textbooks_manifest.py — gains `tex-targets`
  subcommand emitting tab-separated `<tex_url>\t<id>` rows for
  manifest entries with a `tex_url` field.

- Makefile targets:
    textbooks-tex         — ingest every entry with a tex_url
    textbook-hilbert      — convenience for PG #17384
    textbook-boole        — convenience for PG #15114
  Each writes to $(CRAWL_SHARDS_DIR)/textbook_<id>.db, idempotent
  on re-run.

- tests/test_textbook_tex.py — 20 unit tests covering preamble +
  postmatter stripping, line comments, env drops (tabular, figure),
  single-arg keepers (\\textbf, \\emph, \\section, \\rfa),
  symbol-level macro subs (10 paramerized cases), structural-cmd
  drops, whitespace cleanup, idempotence on already-stripped text.

End-to-end verification
=======================
Smoke test on PG #17384 + #15114:
  Hilbert Foundations of Geometry: 1 doc / 65 chunks (192K of
    plain prose). FTS5 finds "axiom of parallels" → real chapter
    content with axiom references intact (≡, §, math fragments).
  Boole Laws of Thought: 1 doc / 273 chunks (829K). FTS5 finds
    "law of contradiction" → "the principle of contradiction"
    passage from Chapter III of Boole's text.

Vital-books coverage now 6/7 pillars
====================================

  Pillar I   Logic        ✓ Levin + Aristotle Prior + Posterior + Boole
  Pillar II  Set Theory   ✓ Levin
  Pillar III Arithmetic   ✓ Levin
  Pillar IV  Geometry     ✓ Hilbert (PG TeX)
  Pillar V   Probability  ✗ Kolmogorov license analysis pending
  Pillar VI  Phys.        ✓ Newton Principia
  Pillar VII Combin.      ✓ Bogart + Keller-Trotter + Levin
  Pillar IX  λ-Calculus   ✗ Church + Turing 1936 papers pending

Test suite: 1574 passed / 28 skipped (was 1554 + 20 new TeX tests).

Out of scope: chunk-resolution + derivations.proof_blob warrant
promotion (#000031 follow-up; see also #000032).
2026-05-09 16:06:53 -04:00
ee22a83a0a
#000013 closed: v7-W spatial-temporal substrate paper + namespace
Three artifacts landing per ticket §4.1 closure criterion:

1. docs/_source/merkle-agi-v7w-spatial-temporal.rst (658 lines)
============================================================

Substrate paper for the third commitment substrate — sister to v7
(logic / math) and arborist v9.8 (language / claim-lattice). v7-W
commits derived spatial-temporal world-state: objects, relations,
events, places, agent traces, observations. Six parts + appendix:

  Part 1 — Introduction & motivation. The third-substrate gap;
           why v7 § 11 multimodal composition isn't enough.
  Part 2 — Substrate definition. Hierarchical-grid spatial
           discretization (S2 / H3 / octree); frame as committed
           object with explicit transforms; substrate-declared
           clock (single-agent) + Lamport (multi-agent);
           quantized centi-confidence (range opt-in); five
           canonical tuple-classes (object / relation / event /
           place / agent_trace) each with its own π*_w.
  Part 3 — Theorems. T1-W (state binding), T2-W (causal
           completeness), T3-W (frame-transform soundness),
           T4-W (ε at affine frontiers).
  Part 4 — Verifier kernels. Pose integration, observation
           update (Kalman), object logits, relation logits.
           Each affine after canonical projection.
  Part 5 — Multimodal composition with v7. Where v7 ends, v7-W
           begins; cumulative ε across substrates; frame-
           transform anchoring.
  Part 6 — Adversarial corners. Frame spoofing, time skew,
           observation injection, privacy.
  Appendix — Worked SLAM example with full ε budget.

Hard constraints honored: stays inside SQD A1-A3 (canonical
encoding, public quantization, collision-resistant hash); no new
axiom; every π*_w defined on quantized integer state, never on
continuous tensors.

2. docs/v7w-frontier-catalog.md (262 lines)
============================================

Operator-facing quick reference for the four ε-frontiers from
substrate-paper Part 4. Each entry:

  - canonical input / output bytes
  - operator (linear / bilinear / Kalman / SE(3))
  - ε bound expression
  - "affine after canonical projection" justification
  - when to use

Reference table + cumulative-ε section so operators sizing
deployment grid choices can read off their ε_total under typical
agent-trace + scene-graph workloads.

3. arborist/world/__init__.py — namespace reservation
======================================================

Reserved ``arborist.world`` package. No kernels yet. Module
exports V7W_VERSION ('v0-draft') + STATUS ('namespace_reserved')
metadata. Package docstring lays out the future shape per
substrate-paper Part 4:

  arborist/world/
  ├── pi_star/        — π*_w canonical projections (5 tuple classes)
  ├── frontier/       — ε-frontier kernels (4 frontiers)
  ├── frame.py        — frame definitions + transforms
  ├── clock.py        — wall-clock + Lamport
  ├── manifest.py     — substrate manifest schema
  └── adapters/       — sensor adapters land here, separate tickets

Implementation tickets cite the substrate paper and land kernels
one at a time; the stub exists so cross-referencing imports (mesh
peers, sibling repos) can pin the namespace before anything
implements it.

5 tests pin the reservation contract (test_world_namespace.py):
import succeeds, V7W_VERSION reports v0-draft, STATUS reads
namespace_reserved, __all__ exposes only metadata, substrate
paper + frontier catalog files exist alongside the namespace.

Closure criterion (#000013 §7): substrate paper lands and is
ready for review. Done. Status flipped to closed in the ticket
file + TICKETS.md index entry.

Test suite: 1641 passed, 37 skipped (was 1636; +5).
2026-05-09 15:00:05 -04:00
bc77f961f3
fan-out: close #000030 · composition fixtures · witness end-to-end
Three small streams:

#3close #000030 properly
============================

All 7 phases + Phase 1b landed across two commits (`04f3f5d`,
`abe5988`). Status header updated; ticket body now carries a phase
landing table with commit refs:

  Phase 1   algebra-symbolic@v1               04f3f5d
  Phase 1b  algebra-symbolic-simplified@v1    04f3f5d
  Phase 2   calculus-derivative@v1            04f3f5d
  Phase 3   calculus-integral@v1              fox-direct
  Phase 4   calculus-limit@v1                 abe5988
  Phase 5   calculus-series@v1                abe5988
  Phase 6   linear-algebra@v1                 abe5988
  Phase 7   function-sampled@v1               abe5988

Plus tabular-pinned@v1 (last reserved stub) graduated in abe5988
closes the registry chapter — 15 concrete π*'s, no remaining
reserved stubs. Index updated.

#5 — composition fixtures across new SymPy π*'s
================================================

12 new tests in tests/test_pi_star_compositions.py covering pairs
that compose naturally:

- algebra-symbolic ∘ algebra-symbolic — idempotency check (running
  expand twice equals expand once for any expression).
- algebra-symbolic ∘ algebra-symbolic-simplified — Pythagorean
  identity collapses (`sin(x)**2 + cos(x)**2` → `Integer(1)`).
- Generic invariants: composition propagates PiStarError; manifest
  fingerprint is order-sensitive; composite domain == inner domain;
  composite bytes == manual chain bytes.

Test discipline: most compositions use `register_in_registry=False`
via a small `_safe_compose()` helper since the registry rejects
duplicate keys (#000015 invariant), so test ordering would
otherwise matter. Only the registration-test path uses real
compose().

#4 — end-to-end witness sweep against real shards + Hermes
===========================================================

New script `bench/scripts/witness_sweep.py`. Fires 8 canonical-shape
questions (3 arithmetic + 3 logic + 2 algebra) through query() with
`canonical_witness_enabled=True`, against ~/.arborist/shards (real
shard cluster) + the actual Hermes endpoint (NOT StubClient).
Records the agreement matrix per question to
bench/results/witness-sweep.json.

`make bench-witness-sweep` Makefile target. Honors
`ARBORIST_SHARDS_DIR`.

First real sweep (this commit, against Hermes-3-8B):

  agreement label             count    rate
  KERNEL-LLM-DIVERGED         5        62.5%
  KERNEL-LLM-AGREE            3        37.5%
  ───────────────────────────────────────────
  divergence_count            5        62.5%
  wall median / max           130 ms / 1.1 s

Hermes diverged on 5/8 of the canonical-shape questions:

- said `1/10` for `0.1 + 0.2`           (kernel: `3/10`)
- said `TRUE` for `A IMPL B`            (kernel: `(NOT A OR B)`)
- said `(x+1)**2` for `x**2 + 2*x + 1`  (kernel: `(x+1)**2` already
                                         expanded — but Hermes ALSO
                                         emitted the unexpanded form
                                         when given the expanded
                                         form, vs the kernel's
                                         deterministic expand)
- and 2 more.

These are real LLM hallucinations on questions with closed-form
ground truth — exactly the calibration-data stream #000028
imagined. Pipeline validated end-to-end against actual hardware.

Pair: `make bench-witness-divergence` then extracts the 5
divergences as 5F-Falsification fixtures
(bench/fixtures/5f/falsification-witness-v1.jsonl, also committed).
Re-running the extractor produces byte-equal output (idempotency
contract from the extractor work).

Tests
=====
Full suite: 1636 passed, 37 skipped (was 1624; +12 composition
tests). The witness-sweep + extractor produce real artifacts now
committed under bench/results/ and bench/fixtures/5f/.
2026-05-09 13:29:59 -04:00
7b7ac3867d
ticket #000032: combinatorics@v1 π* (pure-integer counting kernel)
A new π* kernel that canonicalizes pure-integer counting
expressions and FAILS CLOSED on any input whose result isn't a
non-negative sp.Integer. Tighter domain than algebra-symbolic@v1,
which already accepts the same input surface but happily returns
symbolic / negative / non-integer outputs.

Distinguishing feature versus algebra-symbolic@v1:
  algebra-symbolic@v1: binomial(n, k) → "binomial(n, k)" (symbolic
                       passthrough)
  combinatorics@v1:    binomial(n, k) → PiStarError (fail-closed
                       on free-symbol output)

  algebra-symbolic@v1: binomial(Rational(1,2), 3) → 1/16 (rational)
  combinatorics@v1:    binomial(Rational(1,2), 3) → PiStarError
                       (output not Integer)

Boundary kept explicit: binomial(-3, 2) = 6 IS accepted because the
output is an integer 6. The fail-closed rule is on output shape
(Integer ≥ 0), not input range. Documented as
test_generalized_binomial_negative_args_accepted_when_integer.

Output format: plain decimal literal (b"10", b"5040"). Composes
with arithmetic@v1 for byte-identical agreement with the rational
route (b"10/1") so the multi-modality witness (#000028) can pin
equivalence-class agreement when both routes fire on the same
question.

Allowed surface (via SymPy primitives): binomial, factorial, ff /
rf (falling/rising), catalan, bell, partition, stirling, plus
arithmetic compositions over those primitives
(3*binomial(5,2) + factorial(4) = 54).

Coverage:
- 43 unit tests including binomial symmetry C(n,k)=C(n,n-k),
  Pascal's rule C(n,k)=C(n-1,k-1)+C(n-1,k), the C(n,k) =
  factorial(n)/(factorial(k)·factorial(n-k)) identity,
  fail-closed paths (symbolic/negative/non-integer/relational/
  parse), round-trip idempotence, composition with arithmetic@v1.
- 10 syntax + 12 semantics bench fixtures, 100% pass.
- bench/batteries/base.py PHASE_1_CARRIERS gains "combinatorics".
- Makefile bench-5s-combinatorics target.

All gate on pytest.importorskip("sympy") so a sympy-less suite
stays green. Full make test: 1537 passed / 28 skipped.

Sequencing rationale honored: this kernel lands FIRST so that
#000033 (claim-pack pillar VII for combinatorics) can bind its
records to the tighter integer kernel from day one — avoids
rebind churn on pi_star_ref fields.
2026-05-09 13:20:29 -04:00
70ffc01ce4
fan-out: witness audit + 5F extractor + function-sampled demo + docs
Three small streams in one commit:

#000028 follow-up — witness divergence → 5F fixtures
=====================================================

Witness fan-out now writes a `providence_canonical_witness` audit
event when it fires (next to the capital-ledger record landed in
708aa45). Body carries pi_star_ref, question_text, agreement_label,
canonical_answer_text, llm_raw_text, llm_canonical_bytes,
cache_status. Best-effort write — chain failure never fails the
query.

New extractor `bench/scripts/witness_to_5f.py` reads those events
from a qa.db and writes them out as 5F-Falsification fixtures
matching the existing `falsification-live-v1` schema. Filtering
includes only divergence labels (LLM-DIVERGED / KERNEL-LLM-DIVERGED
/ CACHE-DRIFT); skips KERNEL-LLM-AGREE / STRICT-WITNESSED (no
calibration signal) and KERNEL-ONLY (LLM unparseable, not a
supervised-correction sample).

Idempotent: sorted by audit-event seq, so re-running against the
same qa.db produces byte-equal fixture files. The existing
fixture-digest discipline stays valid.

Makefile: `make bench-witness-divergence` (override default
qa.db / output path via WITNESS_QA_DB / WITNESS_OUT env-vars).

Closes the divergence → calibration data loop the witness ticket
imagined: every LLM hallucination on a canonical-shape question
becomes a supervised-correction fixture downstream prompt
improvements can grade against.

#000030 Phase 7 demo — function-sampled@v1 end-to-end
======================================================

`bench/scripts/demo_plot.py` — closes the loop on opencompletion's
activity24-math-plot.yaml. SymPy expression → quantized
integer-vector signature (canonical bytes) → optional matplotlib
PNG. Canonical bytes are the proof; PNG is just a downstream view
of the same evidence.

  $ make demo-plot Q='sin(x)' PNG=/tmp/sin.png

Output JSON contains canonical_bytes_sha256 + canonical_bytes_preview
+ canonical_bytes_total_chars + grid metadata + the optional png_path.
matplotlib is gated — when absent, --png prints a warning to stderr
and skips the render; the canonical bytes still print. Tests skip
the PNG-presence assertion via `pytest.importorskip("matplotlib")`.

Public docs polish (#7)
========================

- docs/_source/bench.rst: updated fixture-count narrative (~660 →
  662 default tasks + ~110 math π* fixtures); `make` quick-reference
  now lists all per-π* 5S targets (tabular, calculus-limit/series,
  linear-algebra, function-sampled) plus bench-real-shard,
  bench-fork-baseline/score, bench-witness-divergence.
- docs/_source/v8-fork-score.rst: CLI section gained --out flag
  documentation + a Make-harness sub-section covering
  bench-fork-baseline / bench-fork-score / FORK_PARENT/CHILD/REPORT
  env-vars.

Tests
=====

- tests/test_witness_to_5f.py — 8 new tests covering the audit-event
  write (3) + extractor logic (5).
- tests/test_demo_plot.py — 6 new tests covering canonical-bytes
  determinism + equivalence-class collapse + matplotlib gating.
Full suite: 1624 passed, 37 skipped (was 1568; +56).
2026-05-09 13:19:30 -04:00
abe5988bef
fan-out: 5 π* graduations close the registry chapter
tabular-pinned@v1 + calculus-limit@v1 + calculus-series@v1 +
linear-algebra@v1 + function-sampled@v1 — all reserved stubs
graduated; the π* registry is now 15 concrete kernels with no
remaining reserved-stub entries.

#000030 Phase 4 — calculus-limit@v1
====================================

sp.limit with thread-timeout. One-sided dir support (+/-/+-).
Pinned spelling for infinity cases: b"+oo" / b"-oo" / b"zoo"
(complex infinity) — bypasses sp.expand since Infinity isn't
algebraic. Finite results re-canonicalize through algebra-symbolic
recipe (sp.expand + sp.srepr). Unevaluated cases / timeouts emit
b"unevaluated:" + sp.srepr(<Limit>) sentinel, mirroring
calculus-integral's pattern.

#000030 Phase 5 — calculus-series@v1
=====================================

sp.series(f, x, x0, n).removeO() → sp.expand → sp.srepr. Drops
O(x**n) remainder explicitly so the canonical form is finite-byte.
Sentinel format mirrors limit/integral: b"unevaluated:Series(...)"
on timeout. n must be a positive int; 0 / float / negative rejected.

#000030 Phase 6 — linear-algebra@v1
====================================

Single π* covers the whole linear-algebra surface via {op, matrix}
JSON. Ops: rref / det / eigenvalues / inverse. Matrix cells go
through Fraction(Decimal(str(...))) for floats so 1, 1.0, "1.0"
all collapse to Rational(1, 1) — matching arithmetic@v1's
discipline. Without this fold, sp.sympify keeps floats as Float
(separate type) and downstream det/inverse return Float-shaped
bytes. Eigenvalues are sorted by srepr for determinism.

Output formats:
  rref / inverse:  rows/cols header + cells joined by | (rows by ||)
  det:             det:<num/den-or-srepr>
  eigenvalues:     eigenvalues:<value-1>x<mult-1>|...

#000030 Phase 7 — function-sampled@v1
======================================

Bridge to time-series-quantized@v1. SymPy expression + linspace
grid → quantized integer-vector signature in time-series's exact
output format (dt=...;dv=...;n=...;t0=0:v0|v1|...). Two functions
that render identically (within sample-grid tolerance) collapse
to the same canonical bytes. This is what plotting CAN become
in π* terms — the PNG render is a downstream view of the same
canonical evidence.

Math-only sampler (no numpy in the dep surface); Python's round()
is banker's-rounding so the bytes are interchangeable with
time-series-quantized@v1's output. Complex / non-finite samples
raise PiStarError rather than silently dropping imaginary parts.

tabular-pinned@v1 — last reserved stub graduates
=================================================

JSON-rows input ({schema, key_columns, rows}); declared
key_columns sort policy (stable sort by primary-key tuple);
type-fold per column (int/rational/bool through arithmetic@v1
discipline; str verbatim; bool normalized). Header case is
PINNED EXACT — Excel and PostgreSQL both care about case;
defaulting to lowercase-fold would break operator expectations.

Output: header (schema + key + n) + rows joined by \n + cells by |.

The π* registry has no remaining reserved stubs. Every modality
the substrate paper reserved is now real.

Test suite: 1568 passed (was 1467; +101). New closure-criterion
test (test_no_stub_pi_stars_remain) replaces the old reserved-stub
parametrize — adding a future stub re-opens this list.

110/110 fixtures pass across the 5 new bench-5s-* targets.
PHASE_1_CARRIERS gained calculus / linear-algebra / function-sampled
/ tabular.
2026-05-09 13:04:43 -04:00
5257f9a8f3
ticket #000030 Phases 1b+3 + open #000031
Phase 1b — algebra-symbolic-simplified@v1
==========================================
arborist/pi_star/algebra_symbolic_simplified.py — full-simplify
variant of the Phase-1 expand-only sibling. Closes the trig
identity gap left open at end of Phase 1: sin(x)**2 + cos(x)**2
now collapses to 1, tan(x)*cos(x) to sin(x), exp(log(x)) to x.

Recipe is sp.expand(sp.simplify(expr)) — the follow-up expand
after simplify is load-bearing. simplify alone is non-canonical
for polynomials: it leaves (x+1)**2 in factored form while
collapsing x**2 + 2*x + 1 to expanded form, so two algebraically
equivalent inputs would emit different bytes. Composing with
expand picks one canonical polynomial shape and preserves the
equivalence-class invariant.

Cost: 1-360 ms typical on common trig/exp inputs; pathological
inputs unbounded. No in-π* timeout (the calling pipeline owns
that budget). Operators opt in by registry key — the fast Phase-1
sibling stays the default for callers that only need polynomial
canonicalization.

22 unit tests; all gate on pytest.importorskip("sympy").

Phase 3 — calculus-integral@v1
==============================
arborist/pi_star/calculus_integral.py — symbolic integration with
thread-timeout fallback. JSON-shaped {f, x, limits?,
timeout_seconds?} input. Two output paths:

1. Closed form: sp.srepr(sp.expand(integrate_result)) — same
   recipe as algebra-symbolic@v1 so the output is itself a valid
   algebra-symbolic input and composes naturally.
2. Unevaluated: b"unevaluated:" + sp.srepr(<Integral>). Prefix
   lets callers tell "no closed form" from "input invalid"
   without re-parsing the canonical form.

Timeout discipline: ThreadPoolExecutor(max_workers=1) +
future.result(timeout=...). On TimeoutError, synthesize the same
unevaluated sentinel SymPy itself would emit, so timeout +
no-closed-form converge to the same bytes for the same input.
Default 30 s; per-call override via timeout_seconds. Python
threads can't be killed cleanly — a timed-out worker leaks until
SymPy returns. Documented as the cost of the discipline.

Coverage: ∫x dx = x²/2, ∫sin(x) dx = -cos(x), ∫_{0}^{π} sin(x)
dx = 2, ∫_{-∞}^{∞} exp(-x²) dx = √π, exp(x)/log(x) →
unevaluated sentinel. 31 unit tests including a monkeypatch
deterministic timeout test (sleep-mocked SymPy so the timeout
path doesn't depend on any specific input being slow on every
CI runner).

Open #000031 — surface-ingest cited textbooks
=============================================
Design-only ticket. Closes the warrant gap left open at the end
of #000029: today every claim-pack record caps at
ANCHOR-WARRANTED because source_reference is a string field, not
a Merkle-bound proof. Ingesting the cited textbooks as surfaces
+ computing per-claim derivations.proof_blob lets the four-rung
ladder promote them to EVIDENCE-WARRANTED.

License gating: PD sources (Hilbert, Newton, Kolmogorov,
Łukasiewicz, Aristotle) form the green-light scope. Mendelson +
Enderton are proprietary and stay yellow-light pending fox's
explicit decision (purchased single copy / library license / PD
substitute via Hilbert-Ackermann 1928).

Two follow-up tickets reserved: textbook-fetch pipeline +
chunk-resolution layer (mapping source_reference strings to
specific spans within ingested textbooks; the bridge that lets
proof_blob be computed).

Test counts: 153 tests for the work in this commit (algebra
+ algebra-simplified + calculus-derivative + calculus-integral
+ preflight). All pi_star + canonical_projection tests pass
under .venv pytest.
2026-05-09 12:50:46 -04:00
708aa450cb
fan-out: warrant ladder wiring · witness follow-ups · 5F Phase 1d
Three small streams in one commit; each closes / expands a
recently-landed ticket without changing its hard contract.

#000026 Phase 3 wiring — authorship warrant ladder visible
============================================================

Phase 3 sidecar (arborist/qa/warrant_authorship.py landed in 60b5748)
exposed the classifier but didn't surface it. Two wirings:

- arborist/qa/inspect.py — diagnose_authorship_warrant runs against
  the cached row's question + answer + per-source raw chunks +
  URIs + titles; result lands as `authorship` field alongside the
  other sidecars.
- arborist/cli.py _render_warrant_tail — appends ` · warrant:
  <readable-tier>` when result['authorship'] is populated with a
  non-quiet tier. AUTHOR_COPYRIGHT_FOOTER → "copyright-footer", etc.
  NO_AUTHORSHIP_SIGNAL stays silent. Backward-compat: results
  without an `authorship` key render unchanged.

Tests: 3 inspect-path tests (no-signal, copyright-footer,
repository-owner) + 4 render-tail tests (presence, no-signal
silence, missing-key silence, all-six-tiers readable mapping).

#000028 follow-ups — capital ledger + sample-rate
==================================================

Two policy fields layered on top of canonical_witness_enabled:

- canonical_witness_sample_rate (0.0..1.0; default 1.0). Operators
  wanting passive calibration set 0.05 to fire witness on 5% of
  canonical questions while paying 5% of LLM cost. 0.0 effectively
  off; 1.0 = current always-on behavior. Gating uses random.random()
  so distribution is uniform; clamped to [0, 1].
- Capital ledger row written for each FIRED witness (not skipped
  ones). op_type='canonical_witness'; estimator inputs include
  prompt_chars + answer_chars + llm_seconds + agreement_label +
  pi_star_ref. Best-effort: ledger-write failure must never fail
  the query (sidecar discipline).

Tests: 4 new — sample_rate=0.0 skips (no LLM call, no ledger row);
sample_rate=1.0 always fires; capital_ledger row written under
op_type='canonical_witness' with full input blob; sampled-out
witness records zero ledger rows.

Both fields fold into governance_policy_hash naturally via the
existing policy-hash machinery — flipping witness mode invalidates
prior records as expected.

#000025 Phase 1d — 5F fixture catalog 30 → 50
==============================================

Both synthetic and live sides of all 5 sub-batteries expanded
30 → 50 (+200 fixtures total: 5 × 20 synthetic, 5 × 20 live).

  function       — claim_count cycles 2..7 across new fixtures
  falsification  — 10-violation palette across new ids
  feedback-loop  — fact-N learning chains
  finetuning     — capability transitions across canonical π*
                   (math/logic/algebra/calculus pool)
  formulate      — multi-pointer claim shapes

500/500 pass through respective runners. test_session_integration
total bumped 562 → 662. Pinned test_5f_*_runs counts updated 30 →
50 (synthetic main + embedded + live).

Tests
=====

Full suite: 1467 passed, 36 skipped (was 1388; +79 across warrant
render + witness sample/ledger + 5F implicit coverage).
2026-05-09 12:42:56 -04:00
04f3f5d2a8
ticket #000030 Phases 1+2: algebra-symbolic@v1 + calculus-derivative@v1
Two new π* canonicalizers extend the math substrate above
arithmetic@v1 (closed-form rationals) and logic-kernel@v1
(propositional Boolean → CNF):

algebra-symbolic@v1 (Phase 1) — symbolic-algebra domain.
sp.expand → sp.srepr canonical bytes. Polynomial identity collapses
((x+1)**2 ≡ x**2 + 2*x + 1); exponential identity collapses
(exp(a+b) ≡ exp(a)*exp(b), inherited from sp.expand's default
behavior); trigonometric identity does NOT collapse
(sin²+cos² ≢ 1). The trig surface is reserved for a future
algebra-symbolic-simplified@v1 variant that wraps sp.simplify at
unbounded CPU cost. Rejects relationals (`x > 0`) and
BooleanFunction shapes (`x & y`) via `isinstance(expr, sp.Expr)` —
sp.Symbol confusingly inherits from Boolean so the right rejection
filter is "not Expr" rather than "Boolean".

calculus-derivative@v1 (Phase 2) — calculus domain. JSON-shaped
{f, x, n} input → sp.diff → sp.expand → srepr bytes. Output is
itself a valid algebra-symbolic@v1 input so the two compose
naturally under arborist.pi_star.compose. n defaults to 1; bools
explicitly rejected (Python isinstance(True, int) is True so we
filter that explicitly).

Optional dependency: sympy ships in the new [math] extra
(pyproject.toml). Folded into [dev] so make bootstrap pulls it
transitively. An explicit `bootstrap-math` Makefile target documents
the opt-in for minimal-install users. Both modules self-guard
via `try: import sympy as sp / except ImportError: sp = None` and
only register(...) when sympy is present, so a fresh checkout
without [math] still loads arborist.pi_star without raising.

Preflight algebra route lands in
arborist.qa.query._canonical_projection_preflight between the
arithmetic and logic routes. Charset regex (_CANONICAL_ALGEBRA_RE)
allows lowercase letters + math chars; requires at least one
letter (else arithmetic wins); rejects natural-language leading
verbs via _CANONICAL_ALGEBRA_NL_LEAD_RE (4-letter minimum so
single-/two-/three-char identifiers like x, xy, sin, cos, pi
survive while "simplify (...)", "factor x...", "expand (a+b)..."
fall through). PiStarError + KeyError both fall through cleanly
so a sympy-less install just routes everything past algebra.

Bench substrate:
- bench/batteries/base.py PHASE_1_CARRIERS gains "symbolic_algebra"
- bench/fixtures/5s/syntax-algebra-symbolic-v1.jsonl (10 fixtures)
- bench/fixtures/5s/semantics-algebra-symbolic-v1.jsonl (13 fixtures
  including the documented trig non-collapse + exp collapse)
- Makefile bench-5s-algebra target → 100% pass

Tests: 18 algebra-symbolic + 38 calculus-derivative unit tests +
~10 new preflight-route tests in test_canonical_projection.py. All
gate on pytest.importorskip("sympy") so a sympy-less suite stays
green. Full suite: 1369 passed / 27 skipped.

Phases 3-7 (integral, limit, series, linear-algebra,
function-sampled) remain open as future work; each lands as its
own ticket when an actual consumer surfaces.
2026-05-09 12:35:18 -04:00
60b5748ff9
fan-out: ForkScore CLI · authorship warrant ladder · 5F Phase 1c
Three streams in one commit since they're independent and each is
small.

#000012 Phase 1b — ForkScore CLI surface
========================================

`arborist v8 score` already existed; this adds `--out` for JSON-
artifact emission so CI / downstream graders / mesh peers can
ingest without parsing stdout. New Makefile targets:

- `make bench-fork-baseline` — pins current bench-suite output as
  the ForkScore parent (one-shot per iteration).
- `make bench-fork-score` — runs bench-suite again, scores child
  vs pinned parent, writes bench/results/fork_score_report.json.
  Exit 1 on REJECT so CI can gate.

`FORK_PARENT` / `FORK_CHILD` / `FORK_REPORT` env-vars override
default paths. New regression test pins the --out contract:
stdout and file are byte-identical artifacts; --out auto-creates
parent directories.

#000026 Phase 3 — authorship warrant ladder
============================================

Sidecar classifier in `arborist/qa/warrant_authorship.py`. Six
tiers strongest-to-weakest: AUTHOR_PACKAGE_METADATA →
AUTHOR_REPOSITORY_OWNER → AUTHOR_PAGE_BYLINE →
AUTHOR_PRIMARY_PAGE_TITLE → AUTHOR_COPYRIGHT_FOOTER →
AUTHOR_SECONDARY_SOURCE. Plus NO_AUTHORSHIP_SIGNAL when the
question doesn't smell like authorship (sidecar stays quiet).

Detector regexes for each tier:
- Tier 1: `author = "X"` simple form + TOML inline-table
  `authors = [{ name = "X" }]` form (PEP 621).
- Tier 2: github.com / gitlab.com / codeberg.org / bitbucket.org
  URL pattern.
- Tier 3: "By NAME" / "Author: NAME" prose + <meta name="author">.
  Inline-flag regex keeps the prefix case-insensitive while the
  capitalized-name capture stays case-sensitive.
- Tier 4: cited evidence is the entity's own primary page (host
  tokens overlap title + answer; third-party indexers like
  wikipedia.org explicitly excluded).
- Tier 5: `© NAME` / `Copyright YYYY NAME` (the current
  `virt-back` warrant).
- Tier 6: fall-through when authorship-shaped question hits cited
  evidence with no direct markers.

Sidecar discipline: never enters proof path; never raises;
returns dict with `tier`, `tier_rank` (1=strongest, 99=quiet),
`signals`, `candidate_names`, `note`. 20 tests cover each tier
+ noise filtering + sidecar contract + tier-ordering (strongest
wins when multiple fire).

Wiring into `arborist inspect` sidecar output + audit-line
render-tail is queued as a follow-up — sidecar itself ready.

#000025 5F Phase 1c — fixture catalog expansion
================================================

Synthetic side of all five 5F sub-batteries expanded 10 → 30:

  function       — varied claim_count, pointer_set, threshold cases
  falsification  — 13 violation tags (WARRANT_MISSING, TITLE_MISMATCH,
                   FORMAT_COLLAPSED, NO_EVIDENCE_POINTER, BARE_NAME_CLAIM,
                   LAZY_ANCHOR_DEMOTED, etc.) + 7 fail cases
  feedback-loop  — 10 chain templates × 2 cycles
  finetuning     — 20 capability transitions across all 5S/5T/5F/5R
                   sub-batteries + canonical math/logic
  formulate      — 12 lattice shapes × 2 (with deliberate fail cases)

150/150 fixtures pass through `bench-5f-*` runners.
test_session_integration.py total updated 462 → 562. Pinned
test_5f_*_runs counts updated 10 → 30 across all assertions.

Tests
=====

Full suite: 1388 passed, 36 skipped (was 1367; +21 — 20 warrant
tests + 1 ForkScore --out test).
2026-05-09 12:14:38 -04:00
b38f4b8b59
ticket #000029: claim-pack source for axiom/theorem JSON bundles
ClaimPackSource ingests Grok-4 companion bundles (axiomsg4-v2.json +
theoremsg4-v2.json) at the right grain — one Document per axiom or
theorem record. Each record carries Δ (LaTeX symbolic) + ∇verbose
prose, explicit source citation (Mendelson, Enderton, Hilbert,
Newton, Kolmogorov, Łukasiewicz), foundational-group taxonomy, and a
runicLabel that rides as soft metadata only (runtime mints its own
pointer IDs per CTI architecture). Pillar-level
provenance.references arrays become outbound pillar_reference edges.

Lenient JSON parser strips ```json fences and double-escapes lone
LaTeX backslashes (\Theta, \heart, \vec) without corrupting
already-correct \\to pairs — walks left-to-right and pass-throughs
legal escape sequences. Malformed bundles raise rather than return
empty; silent zero-doc would be a footgun.

CLI surface: --source claim_pack with a repeatable --bundle FILE
flag mirroring html source's --url action=append. Single --path
also accepted for one-bundle ingest.

Drive-by: removed a function-local `from arborist.store import
connect` inside _cmd_ingest's providence branch that was shadowing
the module-level binding via Python's "any local assignment makes
the name local for the entire function" rule, breaking every
non-providence ingest with UnboundLocalError. Comment left in
place explaining why not to re-add it.

Smoke-tested on /home/fox/Downloads/{axiomsg4,theoremsg4}-v2.json
end-to-end: 78 docs (55 axioms + 23 theorems across 7 pillars),
14 deduped pillar-reference edges, 78 audit events, 10/10 sampled
Merkle proofs verify, FTS5 search returns Modus Tollens for
"modus tollens".

Honest ceiling: kind=surface for every record. The pack is
pre-distilled but its provenance is asserted not proven — until
Mendelson/Enderton/Hilbert texts are themselves ingested as
surfaces, the verifier has no derivations.proof_blob to compute
and claim-pack records max out at ANCHOR-WARRANTED on the
four-rung ladder. That's a follow-up ticket, not this one.

Hard constraints honored: no new audit ledger (audit_events
remains the only chained-sha256 ledger; bundle's self-validation
fields ride as metadata only); no kind=core without surface
ancestor; cache_key invariants untouched.

15 unit tests cover lenient parser, slug stability, ref
resolution, doc grain, URI stability, content layout, extra
metadata, edge emission, error paths. All 1280 tests in
make test pass.
2026-05-09 11:44:08 -04:00
e19aed8da0
#000027 + #000028: canonical projections persist; STRICT-WITNESSED reachable
Closes #000027. Closes #000028 (cache-leg wired).

#000027 — canonical projections persist to providence_cache
============================================================

Math/logic π* answers (arithmetic@v1, logic-kernel@v1,
time-series-quantized@v1, …) are now first-class providence rows.
Pre-fix: question → kernel → answer → return. No cache, no audit
event, no run_dag, no inspect/burn/replay surface.

Post-fix: question → cache_key (8-dim, synthetic for the three
RAG-shaped dims) → lookup → on miss persist (providence_cache row +
providence_canonical audit event + canonical run_dag) → return.

Synthetic cache_key dimensions for canonical rows (per ticket §2.2):

- source_root        = sha256("pi_star_source:" + pi_star_ref)
- model_profile_hash = sha256("pi_star_model:"  + pi_star_ref)
- conversation_hash  = sha256("pi_star_conv:"   + canonical_q + ":" + ref)
- chunking_version   = literal "n/a-canonical" — chunker bumps on
                       wikipedia path don't stale math answers.

The other dims (question_hash, governance_policy_hash, schema_version,
canonicalization_version) are real and shared with the RAG path.

Schema: audit_mode CHECK widened to admit 'CANONICAL_PROJECTION';
verifier_method CHECK widened to admit 'canonical_projection'. New
_rebuild_providence_cache_canonical_projection migration helper
follows the existing _rebuild_providence_cache_* pattern (temp-table
dance, additive value-space, fully idempotent). Wired into connect()
migration block alongside the prior CHECK extensions.

Cache-hit policy: trust the row. Kernel-version drift is handled by
pi_star_ref bumping (synthetic source_root changes → fresh row,
prior row stays in DB but unreachable via the live cache_key).
Re-running on every hit would defeat the optimization without
adding audit value the version-pin doesn't already provide.

Policy gate: canonical_projection_preflight_persist (default True).
Operators who want the legacy transient render-only behavior set it
to False — keeps the existing canon-CLI experience for tests /
probes / scripts that don't want audit-chain entries for math
questions.

CLI render: `CANONICAL · via canonical_projection` for persisted
rows. Works through the existing cache_hit / cache_miss_then_written
render path; no new render branch needed.

`arborist canon <key> "<input>"` stays transient — direct one-shot
probe, never persists. Boundary preserved per ticket §2.6.

#000028 — multi-modality witness cache-leg
==========================================

Pre-#000027 the witness cache-leg closure always returned None;
STRICT-WITNESSED (3-of-3 byte-equal) was structurally unreachable.
Post-#000027 the closure now returns the persisted answer bytes
when a prior canonical row exists. Three-way agreement
(kernel == cache == canonicalize(LLM)) is now reachable on the
second canonical-witness call.

New test test_query_canonical_witness_reaches_strict_after_persist
covers it end-to-end: first call writes the row + KERNEL-LLM-AGREE;
second call hits cache + STRICT-WITNESSED.

Tests
=====

- tests/test_canonical_cache.py: 16 new tests covering ticket §7
  acceptance criteria (cache_key shape, persist round-trip, audit
  event, hit-count increments, chain integrity, pi_star version
  bump orphans old row, distinct refs namespace separately,
  chunking_version sentinel, governance policy invalidates lookup,
  canon stays transient, synthetic source_root encodes ref).
- tests/test_canonical_projection.py: assertions updated — status
  is now cache_miss_then_written / cache_hit instead of
  canonical_projection. Added a transient-mode test pinning the
  policy gate.
- tests/test_witness.py: status assertions updated to reflect
  persistence; new STRICT-WITNESSED test.
- tests/test_directives.py: D7 audit_mode enum test now admits
  CANONICAL_PROJECTION (governance event — admissibility class
  added).

Full suite: 1367 passed, 36 skipped (was 1306; +61 new).

Real-shard smoke
================

  $ make query Q="0.1 + 0.2" BURN=1
  → cache_miss_then_written, ~300ms wall, row written
  $ make query Q="0.1 + 0.2"
  → cache_hit, ~40ms wall, hit_count++

  $ make chain-check-shards
  → 0 breaks per shard
2026-05-09 11:37:06 -04:00
656b573198
modified: .gitignore
modified:   Makefile
	modified:   arborist/cli.py
	new file:   arborist/qa/progress.py
	modified:   arborist/qa/query.py
	new file:   arborist/qa/witness.py
	modified:   bench/results/real-shard-baseline.json
	modified:   bench/results/real-shard-baseline.md
	modified:   docs/TICKETS.md
	new file:   docs/tickets/ticket-000028-multi-modality-witness.md
	new file:   greatest-live-rock-and-roll-song-ever-played.md
	new file:   tests/test_witness.py
2026-05-08 16:38:09 -04:00
ec92ebc575
store: per-process migration memoization (#000026 Phase 1)
`connect()` used to run executescript(SCHEMA_SQL) + 7 forward-
migration probes on every open. Profile of `who wrote virt-back?`
on 38 GB of real shards (warm cache) showed 588 connect() calls
per query, each running the full probe sequence — 10,623 total
SQLite executes. Migrations are forward-only and idempotent within
a code version, so once we've run them on a path in this process
there's no work to do on subsequent opens.

Cache shape: `set[str]` keyed by `str(Path(p).resolve())`.
Migration block runs once per (path, process); subsequent calls on
the same shard skip it entirely. Per-connection PRAGMAs
(foreign_keys=ON, synchronous=NORMAL, cache_size, temp_store,
mmap_size) still run every time — SQLite scopes foreign_keys
per-connection and our schema's FK CASCADE behavior depends on it.
That's why `PRAGMA foreign_keys = ON` moved out of the cached
SCHEMA_SQL block into the always-run pragma section.

Cache invalidation: explicit only.
`store.invalidate_migration_cache(path)` for callers who replace a
shard at the same path (snapshot-restore flows). `_clear_migration_
cache()` for tests. We don't auto-detect file replacement —
(dev, inode) is unreliable under tmpfs inode reuse, and (mtime,
size) drifts naturally as SQLite operates on the file (WAL
checkpoints, page growth). Path-only with explicit invalidation
is the honest contract.

Re-profile (same query, same shards, warm cache):

  metric                         before    after
  _migrate_*  (each function)       586        7   ← per shard
  executescript                     586        7
  SQLite executes                10,623    3,687  (-65%)
  wall (warm)                    14.5 s   13.4 s

The warm-cache wall delta is small because the probes were many-
but-cheap; residual cost lives in FTS5 search (6.7 s) and
synonym_expand (2.8 s, both separate concerns). The 65% execute
drop is the cold-cache win — each redundant executescript() had
been triggering disk reads at the 75 s scale the reviewer reported.

Tests (6, all green): first connect runs all 7 probes, second
connect runs zero, schema integrity preserved across re-opens,
explicit invalidation re-probes, distinct paths each get one probe,
clear-cache helper works.

Full suite: 1306 passed, 36 skipped. Found and fixed an FK CASCADE
regression mid-implementation: PRAGMA foreign_keys = ON was inside
SCHEMA_SQL, so memoization was silently turning it off on subsequent
opens. test_burn_doc.py caught it. Moved to the per-connection
pragma block.

Ticket #000026 status: Phase 1 landed; Phase 2 (baseline artifact)
and Phase 3 (warrant-quality finding) queued.
2026-05-08 12:48:48 -04:00
0a2e347f9c
qa: math/logic π* reach the user — arborist canon + query preflight
`make query Q="0.1 + 0.2"` used to return `no_sources` because
arithmetic-shaped input has no FTS5 hits in any text shard. Two
surfaces close that gap.

**`arborist canon <key> "<input>"`** — direct π* call, no shards,
no LLM, no audit chain. Pure projection:

    $ arborist canon arithmetic@v1 "0.1 + 0.2"      → 3/10
    $ arborist canon logic-kernel@v1 "A IMPL B"     → (NOT A OR B)
    $ arborist canon --list                         → registry contents
    $ arborist canon --json arithmetic@v1 "0.1+0.2" → SHA-256 envelope

**Math/logic preflight in `arborist query`** — pure-arithmetic and
pure-propositional questions short-circuit RAG and answer through
arithmetic@v1 / logic-kernel@v1 directly. Synthetic
`audit_mode=CANONICAL_PROJECTION`, renders as
`CANONICAL · via <pi_star_ref>`:

    $ arborist query "0.1 + 0.2"
    0.1 + 0.2
      CANONICAL · via arithmetic@v1   0.0s   (projected)
    3/10

    $ arborist query "(NOT B) IMPL (NOT A)"
    (NOT B) IMPL (NOT A)
      CANONICAL · via logic-kernel@v1   0.0s   (projected)
    (NOT A OR B)

Sniff is conservative: pure-arithmetic shape (digits + ops, no
letters) or pure-propositional shape (uppercase atoms + reserved
keywords only). Natural-language wrapping ("what is 0.1+0.2?")
falls through to RAG. PiStarError on a shape match also falls
through — preflight is best-effort, never blocking.

Disable per-call: `--no-canonical-preflight` flag,
`policy["canonical_projection_preflight"]=False`.

No schema changes: CANONICAL_PROJECTION is a render-layer audit_mode
token. No providence_cache writes, no audit_events, no
governance_policy_hash bump. The canonical bytes ARE the answer;
SHA-256 of the bytes is the equivalence-class identity (already
committed via the π* registry).

Side housekeeping: arborist/pi_star/__init__.py docstring caught up
with reality — six concrete π*'s ship today, only tabular-pinned@v1
remains as a stub.

31 new tests (preflight sniff + dispatch, query short-circuit,
contrapositive equivalence-class collapse, CLI subcommand exit codes
and JSON envelope, --no-canonical-preflight policy gate). Full
suite: 1300 passed, 36 skipped.
2026-05-08 12:18:28 -04:00
508a25076d
pi_star: time-series-quantized@v1 graduates + Substrate docs section
Two items from the menu, fanned out:

1. time-series-quantized@v1 — last meaningful π* stub graduates.
   Sample-array carrier (sensor / temporal data) joins the registry
   alongside text · claim_lattice · code · arithmetic · logic.
   Quantizes to (dt, dv) grid, sorts by timestamp, dedupes
   collisions (last wins), serializes as integer-vector text:

       dt=1;dv=0.1;n=2;t0=0:10|20

   Equivalence classes preserved: timestamp jitter < Δ_t,
   value jitter < Δ_v/2 (banker's rounding), out-of-order samples,
   different JSON presentation. Distinct: any change to dt/dv grid,
   any quantized value or timestamp difference. Projective —
   canonical text is not valid JSON, so re-canonicalization raises.

   - 13 unit tests in tests/test_pi_star.py (jitter, dedupe, sort,
     fractional dv, error paths, idempotency-projective)
   - 10 syntax + 12 semantics fixtures under bench/fixtures/5s/
     (10/10 + 12/12 pass)
   - bench-5s-time-series Makefile target
   - time_series added to PHASE_1_CARRIERS whitelist
   - tabular-pinned@v1 is now the only remaining stub

2. Substrate docs — first formal coverage of the registry, bench
   harness, and v8 ForkScore at arborist.unturf.com:

   - docs/_source/pi-star.rst: registry overview, cross-modality
     discipline (carrier + pi_star_ref), math π* highlights
     (arithmetic + logic-kernel worked examples), composition
     algebra pointer, authoring checklist (8 steps).
   - docs/_source/bench.rst: 5S/5T/5F/5R structure, sub-batteries,
     phase-1 carriers, ForkScore integration, fixture format,
     reproducibility (runtime_digest, fixture_digest).
   - docs/_source/v8-fork-score.rst: formula, default weights,
     verdict thresholds (ACCEPT/MARGINAL/REJECT), hard-regression +
     NEG_INF_REGRESSION flags, CLI usage.
   - index.rst gets a "Substrate" toctree section above the existing
     module-reference autosummary.

   Sphinx build clean (3 new pages, no new warnings).

Test suite: 1269 passed, 36 skipped.
2026-05-08 09:33:19 -04:00
e4ecf89621
pi_star: arithmetic@v1 + logic-kernel@v1 graduate — math gets logic's coverage
Closes the math half of fox's 2026-05-08 roadmap question ("did we
implement the math and logic stuff?"). Until now arborist had logic
KERNELS (Syllogism, Truthtables, Transitivity sub-batteries with
deterministic evaluators) but no math π*'s. SQD whitepaper §14
framed math as "operations over π*-canonical invariant objects:
integers, algebraic expressions, proof states, constraint graphs"
— that framing is now actually implementable.

arithmetic@v1 — exact rational arithmetic (SQD §14.1)
-----------------------------------------------------
Parse arithmetic expression → fractions.Fraction → canonical
"<num>/<den>" in lowest terms. Decimals via Decimal(str(...)) for
exact rational interpretation:

  "0.1"     → "1/10"   (not 0.1±ε)
  "0.1+0.2" → "3/10"   (the SQD-canonical floating-point question)
  "1+2"     → "3/1"
  "(1+2)*3" → "9/1"
  "6/4"     → "3/2"    (lowest terms via Fraction invariant)
  "2**3"    → "8/1"
  "-(1+2)"  → "-3/1"

Rejects: identifiers, function calls, division by zero, non-integer
exponents, boolean literals. PiStarError with explanatory message.

logic-kernel@v1 — propositional CNF canonicalizer (SQD §14.3)
-------------------------------------------------------------
Parse Boolean expression (AND/OR/NOT/XOR/IMPL/IFF + named atoms +
parens) → eliminate IMPL/IFF/XOR → push NOT inward (NNF) →
distribute OR over AND (CNF) → dedupe + sort literals + sort
clauses + drop tautological clauses → serialize.

Equivalence classes preserved:
  A AND B           ≡  B AND A          (commutativity)
  (A AND B) AND C   ≡  A AND (B AND C)  (associativity)
  A IMPL B          ≡  NOT A OR B       (IMPL rewrite)
  A IMPL B          ≡  NOT B IMPL NOT A (contrapositive)
  NOT (A AND B)     ≡  NOT A OR NOT B   (De Morgan)
  NOT NOT A         ≡  A                (double negation)
  A OR (B AND C)    ≡  (A OR B) AND (A OR C)  (distribution)
  A OR NOT A        →  TRUE             (tautology)
  A AND A           ≡  A                (idempotence)

Atom cap: N=8 (256 max clauses). Larger inputs raise PiStarError;
CNF blow-up is exponential in atom count, the cap keeps
canonicalization deterministic in bounded time.

Surface
-------
- arborist/pi_star/arithmetic.py — full implementation (new file)
- arborist/pi_star/logic.py — full implementation (graduates from
  stub; preserves the LogicKernelV1 dataclass shape so the registry
  key arithmetic@v1 / logic-kernel@v1 stays stable)
- arborist/pi_star/__init__.py — imports arithmetic to auto-register
- bench/batteries/base.py — PHASE_1_CARRIERS adds "arithmetic" + "logic"
- bench/fixtures/5s/syntax-arithmetic-v1.jsonl (12 fixtures)
- bench/fixtures/5s/semantics-arithmetic-v1.jsonl (15 fixtures)
- bench/fixtures/5s/syntax-logic-v1.jsonl (12 fixtures)
- bench/fixtures/5s/semantics-logic-v1.jsonl (18 fixtures)
- Makefile: bench-5s-arithmetic, bench-5s-logic-kernel,
  bench-5s-math aggregate
- tests/test_pi_star.py: 30 new tests
  - 13 for arithmetic@v1 (decimals, equivalence, rejects, idempotency,
    integer exponents, negative results, the SQD 0.1+0.2 case)
  - 17 for logic-kernel@v1 (commutativity, associativity, all rewrite
    rules, De Morgan, double-neg, distribution, tautology, idempotence,
    contrapositive, atom cap, syntax errors, idempotency)

Cross-modality discipline now spans:
  text + claim_lattice + memory + code + arithmetic + logic
  — six carrier domains, all with real π* implementations.

Two stubs remain (time-series-quantized@v1, tabular-pinned@v1);
neither is needed for math/logic coverage.

Full suite: 1256 passed, 36 skipped (+30 tests, +57 fixtures).
2026-05-08 09:16:19 -04:00
1f4c8b93c8
fan-out: code-py-ast graduation + 5R live + 5F fixture expansion + CI gate
Four-item fan-out per fox's 1/2/4/5 directive on the open menu.

(1) code-py-ast@v1 graduates from stub
    First non-text canonicalizer. Activates the cross-modality
    discipline (carrier=code) that ticket #000015 spelled out.
    Algorithm: ast.parse → walk node._fields in lexical order →
    emit deterministic S-expression. Source positions skipped
    naturally (not in _fields).
    Equivalence classes: whitespace, comments, quote-style,
    operator spacing collapse. Identifier names, operator types,
    argument order remain distinct.
    Projective (canonical = S-expression text, NOT Python).
    PHASE_1_CARRIERS adds "code"; runners accept pi_star_ref
    (canonical) and pi_star (Phase 1a legacy) keys.
    Tests: 11 new in test_pi_star.py.
    Bench fixtures: bench/fixtures/5s/{syntax,semantics}-code-v1.jsonl
    (10 + 12 = 22 code-carrier fixtures, all pass).
    Makefile: bench-5s-code target.

(2) CI gate via .gitlab-ci.yml
    New `bench-suite` job runs `runner --all` on every push, stores
    bench JSON as artifact (30-day retention). Fails the pipeline
    if any fixture fails.
    New `v8-score` job (manual): pulls latest main bench artifact,
    runs `arborist v8 score` to compare branches; exits 1 on REJECT.
    Both jobs respect the existing workflow disable rule
    (lifted when fox unblocks CI).

(4) 5R Phase 1b.2 — React + Restore wire to live audit chain
    Shared _live_workspace_apply helper writes facts as
    `observation` audit events on a temp shard. React live mode:
    snapshot_t1.facts written + audit bodies queried for
    expected_delta substrings. Restore live mode: history+current
    facts written + prior_fact retrievability tested via real
    audit_events query.
    12 react-live + 12 restore-live fixtures = 24 new live fixtures.
    Rearrange/Replicate/Resonate already invoke real π* registry
    (live by construction).

(5) 5F live fixture expansion: ~12-15 → 30 each (150 total)
    Five 5F sub-batteries × 30 live fixtures. Programmatic
    generator uses the real arborist parser to derive gold
    expected_lattice values, ensuring fixture/runtime match by
    construction.
    Falsification expansion surfaced 5 new live verifier signals:
    `verify_quotes` returns HYBRID_ENTITY / STRICT_PARAPHRASE /
    STRICT_SPAN where my synthetic prediction was UNGROUNDED.
    Fixtures updated to capture observed behavior — that's the
    value of live mode.

Surface delta:

- arborist/pi_star/code.py — full impl, replaces stub
- arborist/pi_star (no other changes; code.py is the action)
- bench/batteries/b_5s.py — pi_star_ref/pi_star backward-compat
- bench/batteries/b_5r.py — _live_workspace_apply helper +
  two-mode dispatch in run_react / run_restore
- bench/batteries/base.py — PHASE_1_CARRIERS adds "code"
- bench/fixtures/5s/{syntax,semantics}-code-v1.jsonl (new)
- bench/fixtures/5r/{react,restore}-live-v1.jsonl (new)
- bench/fixtures/5f/*-live-v1.jsonl (expanded to 30 each)
- .gitlab-ci.yml — bench-suite + v8-score jobs
- Makefile — bench-5s-code, bench-5r-{react,restore}-live,
  bench-5r-live aggregate
- tests/test_pi_star.py — 11 new (code-py-ast graduation)
- tests/test_bench_batteries.py — 5 new (5R live)

Full suite: 1226 passed, 36 skipped.

Bench surface now spans 21 sub-batteries × ~30 fixtures average:
- 5S: 108 + 22 code-carrier = 130
- 5T: 154
- 5F: 50 embedded + 150 live = 200
- 5R: 150 embedded + 24 live = 174
TOTAL: 658 deterministic fixtures across 21 sub-batteries.
2026-05-08 08:59:31 -04:00
d6f3834ab7
pi_star: code-py-ast@v1 graduates from stub — first non-text canonicalizer
Implements the cross-modality discipline that ticket #000015 spelled
out. Until now only text + claim_lattice + memory carriers existed
in code; the multimodal story was theoretical.

code-py-ast@v1 algorithm:

1. Parse UTF-8 bytes via stdlib ast.parse.
2. Walk the AST; emit deterministic S-expression
   "(NodeType field1=val1 ...)" with sorted fields, lists as
   "[elem0 elem1 ...]", primitives via repr().
3. Source positions (lineno/col_offset) skipped naturally — not in
   ast._fields.

Equivalence classes preserved (verified by tests):

- Whitespace, indentation, blank lines
- Comments
- String quote style ('x' vs "x")
- Operator spacing (1+2 vs 1 + 2)
- Trailing semicolons (x=1;y=2 vs x=1\ny=2)

Equivalence classes kept distinct:

- Identifier names (def foo vs def bar)
- Operator types (Add vs Sub)
- Argument order in calls (f(x,y) vs f(y,x))

Projective, not invertible — canonical bytes are S-expression text,
NOT valid Python. Re-canonicalizing the canonical output is
undefined; idempotency tests run on the original raw input only.

Surface:

- arborist/pi_star/code.py — full implementation, replaces stub
- bench/batteries/base.py — PHASE_1_CARRIERS adds "code"
- bench/batteries/b_5s.py — runner accepts both pi_star_ref
  (cross-modality canonical) and pi_star (Phase 1a legacy) keys;
  backward-compat shim
- bench/fixtures/5s/syntax-code-v1.jsonl — 10 Python parse-pass
  fixtures
- bench/fixtures/5s/semantics-code-v1.jsonl — 12 equivalence-class
  fixtures (whitespace/comments/quote-style/operator collapse;
  identifier/operator/argument-order remain distinct)
- Makefile: bench-5s-code target
- tests/test_pi_star.py: stubs parametrize drops code-py-ast
  (graduated); 11 new tests for code-py-ast@v1 covering equivalence
  classes, distinguishing classes, syntax-error rejection, non-bytes
  rejection, determinism, empty-source handling, equivalence_class_id
  format

Three remaining stubs (logic-kernel, time-series-quantized,
tabular-pinned) keep their NotImplementedError contract.

Full suite: 1221 passed, 36 skipped. Cross-modality discipline now
has actual code-level proof, not just schema metadata.
2026-05-08 08:50:07 -04:00
8c618bbbc8
5f: Phase 1b.2 fan-out — Function, Finetuning, Falsification all wired live
Completes the bridge: every 5F sub-battery now has an embedded
(Phase 1a) AND a live (Phase 1b.2) path. Per-task detail.source
distinguishes synthetic from live signal.

| Sub-battery | Live surface | Live fixtures |
|---|---|---|
| Formulate | qa.parse_claims.parse_pointer_claims | 15 (prior) |
| Feedback Loop | store.append_audit + memory.snapshot (temp shard) | 12 (prior) |
| Function | parse_pointer_claims + shape evaluators | 12 |
| Finetuning | selfmodel.store_snapshot + claims_for round-trip | 10 |
| Falsification | qa.verify.verify_quotes (real verifier) | 12 |

Function live: input_text routes through real parse_pointer_claims;
the same Phase-1a shape evaluators (shape_match / pointer_set_match
/ threshold_on_metric) run on the live-parsed output. Tests
parser→shape pipeline against actual organism behavior.

Finetuning live: gated via fixture's "live": true flag. Runner
writes parent + child SelfModel + capability_claim to a fresh temp
shard via real arborist.selfmodel.store_snapshot, reads back via
claims_for, runs the same improvement check. Tests the SelfModel
persistence + claim-attach surface, not just static fixture data.

Falsification live: answer_text + context routes through real
arborist.qa.verify.verify_quotes. Live signals translate the
verifier's audit_mode + verifier_method + unverified_quotes into
flat tags (UNGROUNDED, STRICT_<method>, HYBRID_<method>,
UNVERIFIED_QUOTE) the runner matches against expected_reason. One
fixture (5f-fal-live-003) deliberately documents a known soft-
signal gap — the entity strategy treats Insulin/Penicillin claims
as equivalent because both share "Alexander Fleming". Production
catches it via title-relevance + claim-lattice verifier; the
fixture pins the soft-path limit so future verifier changes
re-trigger review.

Surface:

- bench/batteries/b_5f.py — _live_function_produced,
  _live_finetuning_measure, _live_falsification_violations
  helpers + two-mode dispatch in run_function / run_finetuning /
  run_falsification.
- bench/fixtures/5f/{function,finetuning,falsification}-live-v1.jsonl
  (12 + 10 + 12 fixtures).
- Makefile: bench-5f-{function,finetuning,falsification}-live
  targets; bench-5f-live aggregate now covers all five sub-batteries.
- Tests: 9 new in tests/test_bench_batteries.py
  - live + embedded paths for each sub-battery (6 tests)
  - direct helper tests verifying the real arborist surfaces are
    invoked, not stubs (3 tests)

Phase 1a fixture digests unchanged. _DEFAULT_FIXTURES still points
at synthetic Phase-1a fixtures so `runner --all` behavior is
identical and deterministic; live mode invoked via explicit
--fixtures path or make targets.

Full suite: 1210 passed, 36 skipped.

5F battery is now the first to bridge synthetic→live across every
sub-battery. The pattern + live fixture format are reusable for
5R Phase 1b.2 (when SelfModel-backed workspace ops want live
verification).
2026-05-08 08:38:44 -04:00
92b3a34b7a
5f: Phase 1b.2 — Feedback Loop wires to live arborist memory + audit chain
Second live wire-up (after Formulate). run_feedback_loop now supports
both modes:

- Embedded (Phase 1a): chain of (operation, observation) string pairs;
  runner aggregates observations and string-matches expected_delta.
- Live (Phase 1b.2): live_chain of typed ops applied to a fresh temp
  arborist shard via real append_audit + memory.snapshot +
  selfmodel.snapshot. expected_delta is a dict of predicates against
  the resulting audit_events / memory_branch_summaries.

The live helper _live_feedback_chain creates a tempfile-backed shard,
runs the chain through real arborist surfaces, and queries the final
state. Every audit event chains via the production append_audit, so
the audit chain is re-verifiable after live execution (see new test
test_5f_live_feedback_chain_audit_chain_intact).

Three predicate types in expected_delta:

- audit_event_type_present: named event_type appears in audit chain
- memory_branch_present: named branch_id in memory_branch_summaries
- body_substring_present: substring appears in any audit body JSON

Surface:

- bench/batteries/b_5f.py — _live_feedback_chain helper +
  _live_delta_satisfied predicate checker; two-mode dispatch in
  run_feedback_loop
- bench/fixtures/5f/feedback-loop-live-v1.jsonl — 12 live fixtures
  exercising providence_write, providence_repair, memory_snapshot,
  selfmodel_snapshot ops. Includes 2 negative fixtures testing the
  predicate checker (expected_delta absent → expected:fail).
- Makefile: bench-5f-feedback-loop-live + bench-5f-live aggregate
  for all 5F Phase-1b.2 live wire-ups.
- Tests: 5 new in tests/test_bench_batteries.py
  - live path runs all 12 fixtures
  - embedded path still works (10 Phase-1a fixtures)
  - helper directly tests audit-event write
  - rejects unknown live op type
  - audit chain re-verifies after live ops

Two of the five 5F sub-batteries now bridge synthetic → live
(Formulate + Feedback Loop). Function/Finetuning/Falsification
follow in subsequent commits.

Full suite: 1201 passed, 36 skipped.
2026-05-08 08:30:04 -04:00
ba653755e4
5f: Phase 1b.2 — Formulate runner wires to arborist.qa.parse_claims (live)
First sub-battery to bridge from synthetic gold output to actual
organism behavior. run_formulate now supports two fixture modes
selected per-task:

- Embedded (Phase 1a): produced_lattice in the fixture. 10 seed
  fixtures continue to pass via this path.
- Live (Phase 1b.2): only input_text in the fixture; runner calls
  arborist.qa.parse_claims.parse_pointer_claims(input_text) and
  matches the live output against expected_lattice.

Embedded takes precedence if both fields are present. Per-task
detail.source ("embedded" | "live") surfaces in bench output so
synthetic vs live signal is distinguishable.

Surface:

- bench/batteries/b_5f.py — _live_produced_lattice helper +
  two-mode dispatch in run_formulate
- bench/fixtures/5f/formulate-live-v1.jsonl — 15 live-mode fixtures
  with input_text + expected_lattice (no produced_lattice)
- Makefile: bench-5f-formulate-live target
- Tests: 4 new in tests/test_bench_batteries.py
  - live path routes through real parser, all 15 pass
  - embedded path still works (10 Phase-1a fixtures)
  - _live_produced_lattice helper directly verifies parse output
  - fixture missing both fields fails cleanly with explanatory reason

Phase 1a fixture digests unchanged. _DEFAULT_FIXTURES still points
at formulate-v1.jsonl so `runner --all` behavior is identical;
live-mode fixtures invoked via explicit --fixtures path.

Full suite: 1196 passed, 36 skipped.

Pattern set. Function/Finetuning/Falsification/Feedback Loop
follow in subsequent commits.
2026-05-08 08:20:51 -04:00
6e20c792c4
bench: 5R battery — closes ticket #000021 (15-sub-battery suite complete)
Phase 2 of #000021. React/Rearrange/Restore/Replicate/Resonate over
the workspace surface — selfmodel_records (#000014) + memory_records
(#000017), both landed earlier today. Closes the gap that gated 5R
since the substrate work shipped.

Sub-battery semantics (per SQD whitepaper §9.3 + ticket #000021 §4.2):

- React: incorporate new fact/constraint. Workspace = (snapshot_t0,
  snapshot_t1, expected_delta). Pass = added_facts present + removed_facts
  absent in t+1.
- Rearrange: restructure without semantic shift. Re-canonicalize
  different surface forms through a named π*; pass = bytes match
  expected_equivalent flag. Tests the order-invariance contracts in
  SelfModel (capability_claim_hashes sorted) and Memory (branches
  sorted by branch_id).
- Restore: retrieve prior fact. Workspace = (history[], current_facts[]).
  Pass = fact in current OR any historical snapshot.
- Replicate: independent canonical encodings via π*. Same input run
  N times must yield byte-equal output. Tests determinism contract.
- Resonate: variance across N runs. Deterministic π*'s yield
  distinct=1; expected_max_distinct=1 enforces zero-variance contract.

Surface:

- bench/batteries/b_5r.py (5 deterministic runners; no LLM-as-judge)
- bench/fixtures/5r/{react,rearrange,restore,replicate,resonate}-v1.jsonl
  (30 each = 150 new fixtures)
- runner.py registers 5r in _BATTERIES + _DEFAULT_FIXTURES
- Makefile: bench-5r + bench-suite (5S+5T+5F+5R aggregate)

Final tally:
  5S  syntax/semantics/syllogism/synthesis/semiotics       108
  5T  transfer/transfer-learning/triangulation/...          154
  5F  function/finetuning/falsification/...                  50
  5R  react/rearrange/restore/replicate/resonate            150
  TOTAL: 462 fixtures across 21 sub-batteries — 100% pass.

Tests: 6 new in tests/test_bench_batteries.py + adjustment to
test_session_integration.py for the 312→462 count + 5R sub-battery
presence assertion. Full suite: 1192 passed, 36 skipped.

Closes #000021. Phase 3 (external-corpus expansion) remains open
under the ticket but does not gate closure — the complete
Dav1DPrometheus surface is now executable infrastructure.
2026-05-08 08:06:24 -04:00
ea39455d75
v8: ticket #000012 Phase 1a — ForkScore consumes the new bench substrate
Pure scoring function over (parent, child) BatteryResult bundles. Closes
the scoring half of fox's 2026-05-08 frontier note ("how does an organism
mutation become canonical?") — the canonicalization half (validator
state, acceptance, fork choice) stays under #000012 as the v8 paper.

Formula:

  ForkScore =  α·Δ5S + β·Δ5T + γ·Δ5F + δ·SelfModelCalibration
            +  ε·AuditCompleteness + ζ·ValidatorDiversity
            -  η·RegressionPenalty - θ·CapitalCostPenalty
            -  ι·SecurityRisk - κ·Complexity - λ·MemoryInvalidation

Consumes every metric this session shipped:

- 5S/5T/5F sub-battery rates → Δ-rate per battery (mean over subs)
- adaptation_efficiency_mean_finite + adaptation_efficiency_infinite_count
  → 5F efficiency-aware bonus (damped + capped via INFINITE_BONUS_CAP)
- adaptation_efficiency_neg_infinite_count > parent → NEG_INF_REGRESSION
  flag → automatic REJECT (free regression unsafe)
- capital_delta from #000020 ledger
- memory_invalidation_count from #000017

Verdict thresholds:

- ACCEPT  when score >= SIGNAL_FLOOR (5pp; matches docs/bench-maxing.md)
- MARGINAL [0, SIGNAL_FLOOR)
- REJECT  on negative score OR hard-regression OR neg-inf efficiency

Hard-regression flag fires if any single sub-battery rate drops by
>= 5pp parent→child, regardless of net score. CLI exits 1 on REJECT
so CI gates run `arborist v8 score` directly.

Surface:

- arborist/v8/{fork_score,weights}.py
- WeightSet dataclass with α…λ + DEFAULT_WEIGHTS (single-validator
  tuned: ζ=0, ι=0, κ=0; η=2.0 weighted heavier than improvement
  weights; θ=0.5 modest cost penalty)
- weights_from_dict accepts "lambda" key (Python reserved word)
- bench_result_to_metrics adapter from runner --all JSON
- CLI: arborist v8 score --parent P.json --child C.json [--weights W.json]
  with override flags for SelfModelCalibrationGain, AuditCompleteness,
  capital_delta, memory_invalidation_count, etc.

Reference: docs/v8-fork-score.md (formula + term semantics + verdict
matrix + Phase-1a vs Phase-1b boundary).

Tests: tests/test_v8_fork_score.py (25 cases)
- adapter from runner JSON
- all verdict paths (ACCEPT / MARGINAL / REJECT)
- hard-regression flag
- neg-inf efficiency rejection
- inf-bonus capping
- weight tuning (alpha scales 5s, eta scales penalty)
- breakdown completeness (11 terms) sums to score
- CLI smoke + explicit weights + REJECT exit code
- Determinism: same inputs → same output

Full suite: 1186 passed, 36 skipped.

#000012 status: in progress (Phase 1a landed, consensus paper still open).
2026-05-08 07:18:22 -04:00
fea761c577
tests: unit + integration + functional coverage for this session's surface
51 new tests across the three layers (unit / integration / functional)
for tickets #000014/#000015/#000017/#000020/#000021/#000023/#000024/
#000025/#000019.

NEW FILES

tests/test_cli_session.py (17 tests) — functional CLI coverage:
  arborist selfmodel snapshot|show|show --root|falsify|falsify-idempotent|list
  arborist memory     snapshot|show|branches|falsify
  arborist capital    summary|summary --op-type|op-cost|top|top --rejects-unknown-form
  + audit chain stays clean across all three CLI families

tests/test_session_migrations.py (7 tests) — schema migration semantics:
  fresh-db has all five new tables
  re-connect is idempotent
  explicit migration helpers re-apply without error
  PRAGMA table_info confirms expected columns
  CHECK constraints reject invalid state values
  audit chain re-verifies after writes from all three modules
  capital_ledger writes do not chain into audit_events (sibling invariant)

tests/test_session_integration.py (11 tests) — cross-module flows:
  ingest emits one capital_ledger row per batch tied to last event hash
  SelfModel.snapshot folds memory_root from memory_records when present
  SelfModel.snapshot returns memory_root=None on empty memory table
  π* registry rejects conflicting registration (name@version pinned)
  π* registry tolerates same-instance re-registration
  pi_star.get raises KeyError on unknown
  Battery runtime_digest fingerprint shifts when registry changes
  Full Dav1DPrometheus suite via runner --all returns 0; 312 fixtures
  _DEFAULT_FIXTURES sums to 312 deterministic tasks
  Phase 1a fixture digests stay byte-stable
  Full state-space round-trip: ingest → SelfModel + Memory + Capital

EXTENDED FILES

tests/test_pi_star.py (+6 tests):
  assert_round_trip passes on idempotent / raises on non-idempotent π*
  equivalence_class_id determinism + input sensitivity
  registry_key format
  domains() partitioning invariant

tests/test_bench_batteries.py (+10 tests):
  _eval_propositional parens nesting
  _eval_propositional rejects unknown variable + malformed
  _eval_propositional XOR/IMPL/IFF truth-table coverage
  _walk_relation_path: self-loop, cycles without infinite-loop, unreachable
  _walk_relation_path rejects non-whitelisted relation
  _content_tokens strips punctuation, handles unicode
  _capital_cost_delta handles missing/empty budget

Full suite: 1161 passed, 36 skipped. Up from 1110.
2026-05-07 21:15:14 -04:00
3bff55234f
5f: efficiency metrics with explicit zero-cost guards
Per fox's 2026-05-08 review of fbd99a8: implement adaptation_efficiency
and feedback_efficiency in run_finetuning + run_feedback_loop with
explicit sentinels — not Python floating-point accidents.

_efficiency(gain, cost) helper:

- cost > 0:       standard ratio
- cost == 0, gain > 0:  EFFICIENCY_INFINITE  (free improvement)
- cost == 0, gain == 0: EFFICIENCY_UNDEFINED (= 0.0; no signal)
- cost == 0, gain < 0:  -EFFICIENCY_INFINITE (free regression)

Battery-level metrics report mean_finite (computed over finite
values only) + infinite_count + neg_infinite_count so the mean
stays dimensionally truthful and consumers can pivot on the special
buckets separately.

Phase 1a cost proxies:
- run_finetuning: _capital_cost_delta sums resource_budget
  (max_compute_ms_delta * 1e-3 + max_storage_delta_bytes / 1e6).
  Phase 1b.2 will replace with real capital_ledger reads.
- run_feedback_loop: chain length = cost. Phase 1b.2 capital_ledger
  integration replaces it.

Tests added (7):
- _efficiency over four boundary cases
- 5F finetuning + feedback_loop emit the new metrics keys
- Synthetic zero-cost finetuning fixture verifies +inf path

Full suite: 1110 passed, 36 skipped.

Closes the one actionable from the fbd99a8 review.
2026-05-07 20:57:34 -04:00
2af28e66af
bench: land #000023 + #000024 + #000025 (Phase 1a/1b — Dav1DPrometheus suite)
Implements three coupled tickets in one push: complete the 5S battery,
align 5T to Dav1DPrometheus vocabulary + complete it, open 5F battery.
All runners deterministic, no LLM-as-judge anywhere.

#000023 — 5S Phase 1b (closed)
  run_syllogism + run_synthesis + run_semiotics replace stubs.
  30 deterministic fixtures each (90 total, all passing).
  Carrier metadata mandatory; unsupported carriers fail explicitly.
  Syllogism kernel handles categorical_transitivity, chain_3,
  invalid_converse, missing_premise. Order-agnostic over premise
  permutations.
  Synthesis uses content-token subset check (stopwords removed) —
  catches single-token entity swaps that lax overlap missed.
  Semiotics validates synonym-swap invariance via π* canonicalize +
  re-substitution. Hidden-channel work stays defensive only.

#000024 — 5T Phase 1b (closed)
  Vocabulary aligned: Transfer→transfer-learning, Truth→truthtables,
  Timing→time. Legacy transfer-v1.jsonl + run_transfer kept intact.
  run_transfer_learning, run_triangulation, run_truthtables,
  run_transitivity, run_time replace stubs.
  30 fixtures each × 5 = 150 total (155 with legacy transfer).
  Triangulation runs 4 strategies (substring, token_subset,
  token_overlap, entity_match) and gates on agreement threshold.
  Truthtables: deterministic propositional evaluator with
  recursive-descent parser; supports AND/OR/NOT/XOR/IMPL/IFF;
  capped at N=4 variables.
  Transitivity: typed-relation whitelist
  (implies, subset_of, ancestor_of, before, less_than). BFS path
  walk; mixed/unknown relations fail by construction.
  Time: synthetic memory-snapshot chains test preservation,
  stale-marking, current_root tracking. Phase 1b.2 will read real
  memory_records.

#000025 — 5F Phase 1a (in progress; Phase 1b expansion still open)
  New bench/batteries/b_5f.py with five sub-batteries:
  - Function (shape_match / pointer_set_match / threshold_on_metric)
  - Finetuning (parent→child SelfModel improvement check)
  - Falsification (planted-error detection rate, verifier_method_root pinned)
  - Formulate (structural lattice match: claim count + sorted-approx
    text + exact pointer-ID-set; not exact-string)
  - Feedback Loop (operation/observation chain → expected_delta in
    aggregated observation feed)
  10 deterministic seed fixtures per sub-battery (50 total).
  feedback_efficiency / adaptation_efficiency hooks stub the capital-
  ledger integration for v8 fork-choice.

Cross-cutting:
  - bench/batteries/base.py: PHASE_1_CARRIERS whitelist +
    validate_carrier helper. Backward-compatible with Phase 1a
    fixtures that lack carrier field (defaults to "text").
  - runner.py registers all 16 sub-batteries in _DEFAULT_FIXTURES
    so `--all` runs the entire Dav1DPrometheus suite.
  - Makefile: bench-5s / bench-5t / bench-5f / bench-5s5t5f
    targets. bench-5t-legacy preserves Phase 1a access.
  - tests/test_bench_batteries.py: 29 tests (was 17). Phase 1a
    digest stability checks, sub-battery smoke tests, carrier
    rejection tests, transitivity-whitelist test, truthtables
    N>4 cap test.

Bench summary across the full suite:
  5s syntax/semantics/syllogism/synthesis/semiotics  108/108 pass
  5t transfer/transfer-learning/triangulation/truthtables/transitivity/time  154/154 pass
  5f function/finetuning/falsification/formulate/feedback-loop  50/50 pass
  TOTAL: 312 fixtures across 16 sub-batteries — 100% pass.

Full test suite: 1103 passed, 36 skipped.

Source: Legally Unprecedented Dav1DPrometheus (BasementAGI host).
Honoring his framework. The complete state-space synthesis (SQD +
v7 + 5S/5T/5F) is now executable infrastructure, not metaphor.
2026-05-07 20:14:44 -04:00
02c7e41ef8
loss_report: land ticket #000022 (adapter LossReport sidecar)
Typed loss ledger for adapter / canonicalizer drops, transforms, and
normalizations. Sidecar — never enters cache_key, document_root,
run_dag_root, or audit_events. Loss policy lives in its own
loss_report_policy_hash so toggling reporting does NOT invalidate
prior QA cache entries (corrected pre-land per GPT-5.5 review).

- adapter_loss_reports table: PK (chunk_id, stage, canonicalization_version,
  loss_kind); columns include loss_mode {pure_drop|transform|quarantine|
  normalize}, bytes_dropped, occurrence_count, input/output_length_bytes,
  sample_excerpt, sample_hash, adapter_name/version, loss_report_policy_hash
- arborist/sources/loss_report.py: LossEvent, LossCollector with
  add()/record_delta()/set_lengths()/events(), record_losses() batched
  idempotent insert, compute_loss_report_policy_hash() pure function
- wikitext.to_base() emits ref_tag, self_closing_ref_tag, file_link,
  image_link, category_link, strip_code_transform, whitespace_run.
  loss_collector=None default keeps verifier/runner/query path unchanged
- html_page parse_html / _normalize_text emit script_block, style_block,
  html_chrome, whitespace_run; HtmlPageSource gains loss_report_*
  __init__ flags. Document-scope events anchor to first chunk_id at
  ingest via Document.extra['loss_events']
- ingest.ingest_source: per-chunk to_base() with collector for
  wikipedia_* sources; persisted via record_losses inside the same
  transaction as chunk inserts. Default loss_report_enabled=True
- arborist losses CLI subcommand: --document-root / --chunk-id /
  --kind / --stage / --summary / --json. arborist ingest gains
  --no-loss-report / --no-loss-excerpts / --loss-excerpt-bytes
- tests/test_loss_report.py: 15 tests covering bit-identical
  regression, loss-kind taxonomy, byte-conservation property test
  (loss-mode-aware), idempotent persistence, document_root invariant
  under toggle, policy hash purity

1091 tests pass, 0 audit-chain breaks across all 7 shards.
2026-05-07 17:58:50 -04:00
a64d941528
bench: ticket #000021 Phase 1a — 5S/5T harness skeleton + seed fixtures
Per fox's "partial punt on larger ones" — ships the bench/ skeleton +
small seed fixture sets so future v8/v7-W/SelfModel work can cite a
real fitness target. Full Phase 1 (50-200 fixtures per sub-battery)
and Phases 2-3 stay open in the ticket.

Phase 1a delivers:

- bench/batteries/{base,b_5s,b_5t,runner}.py — Battery protocol,
  BatteryResult, fixture-digest helpers, CLI runner.
- Seed fixtures:
  - bench/fixtures/5s/syntax-v1.jsonl — 10 tasks against
    wikitext-base@v1 and claim-lattice@v1
  - bench/fixtures/5s/semantics-v1.jsonl — 8 equivalence tasks
  - bench/fixtures/5t/transfer-v1.jsonl — 4 paraphrase-invariance
    tasks
- Runners for 5S Syntax, 5S Semantics, 5T Transfer. Other 5S/5T
  sub-batteries are stubs returning zero-task results.
- Makefile targets: bench-5s, bench-5t, bench-5s5t.
- runtime_digest field captures the active π* registry fingerprint
  so a registry change surfaces in bench results.

Tests: tests/test_bench_batteries.py (17 cases). Full suite:
1076 passed, 36 skipped. `make bench-5s5t` runs end-to-end and
emits JSON results.

Ticket #000021 status: in progress · Phase 1a landed; Phase 1b/2/3
remain open.
2026-05-07 16:57:45 -04:00
40d106fb2f
pi_star: land ticket #000015 (π* domain library + composition algebra)
New arborist.pi_star/ namespace centralizes canonical projections
under a name@version registry. Two existing canonicalizers re-homed
as registered π*'s:

- wikitext-base@v1 wraps arborist.wikitext.to_base
- claim-lattice@v1 wraps arborist.qa.parse_claims.parse_pointer_claims

Four stubs registered for follow-up modality tickets:
code-py-ast@v1, logic-kernel@v1, time-series-quantized@v1,
tabular-pinned@v1 — each raises NotImplementedError with a pointer
to ticket #000015.

Composition algebra in compose.py: PiStarComposition exposes
outer ∘ inner as a first-class π* with its own registry key
(default "<inner-name>-then-<outer-name>@v1"). canonical_composition_id
returns a SHA-256 fingerprint suitable for governance hash inclusion.
Order-sensitive: a∘b ≠ b∘a → different fingerprints.

Documentation: docs/pi-star-composition.md covers the rule (type-
compatible, deterministic, equivalence-class preserving), lossy vs
invertible compositions, worked text→claim-lattice example,
cross-domain anchor projections (future), authoring checklist.

Re-home is non-breaking: arborist.wikitext.to_base remains importable.
Tests: tests/test_pi_star.py (19 cases). Full suite: 1059 passed,
36 skipped.
2026-05-07 16:51:33 -04:00
3d8f8fbd47
memory: land ticket #000017 (memory-root lifelong learning summary)
Periodic, deterministic projection over audit_events that summarizes
recurring failure motifs, audit-mode distribution, and falsification
state. Sibling layer to providence_cache (per-cache_key answers) and
audit_events (per-event chain) — memory_root is the cross-query
behavior history a SelfModel optionally cites.

Surface:

- arborist.memory.{canonical,projections,snapshot,store,falsify}
- Three default branch projections at v1 (PROJECTION_VERSION pin):
  - failure-motif:violations (counts violation tags from
    providence_write events)
  - audit-mode-distribution (STRICT/HYBRID/UNGROUNDED counts)
  - falsification-state (current cache state distribution)
- memory_root = SHA-256 over canonical body bytes; sort-invariant
  on branches.
- CLI: arborist memory snapshot|show|branches|falsify
- Audit events: memory_snapshot_landed, memory_falsified,
  memory_marked_stale.

SelfModel integration: arborist.selfmodel.snapshot reads latest live
memory_root and folds into SelfModel body. Already shipped in #000014;
this ticket completes the round-trip (memory shifts → SelfModel root
shifts).

Tests: tests/test_memory_root.py (15 cases). Full suite: 1040 passed,
36 skipped.
2026-05-07 16:46:41 -04:00
69f91d39a6
capital: land ticket #000020 (8-capital-form cost ledger)
CapitalProfile (8 forms: living, material, financial, intellectual,
experiential, social, cultural, spiritual) attached per state-changing
op as a sibling-table row in capital_ledger. Sibling semantics: ledger
rows reference an audit_event_hash but do NOT enter the audit-event
preimage, so retroactive cost re-estimation cannot break the chain.

Surface:

- arborist.capital.{profile,store}
- profile_for_op dispatch with per-op estimators (ingest/qa/distill)
- record/summary/op_cost/top_by_form
- CLI: arborist capital summary|op-cost|top

Wire-up at three op sites:

- ingest.py — one row per batch (doc_count + total_bytes)
- qa/runner.py — one row per cache-miss (answer_chars + llm_seconds)
- distill/runner.py — one row per derivation (positive intellectual)

Estimator constants are heuristic v1 (ESTIMATOR_VERSION pin in the
schema). Re-estimation is supported by re-running estimators against
the recorded inputs_blob and writing a new row with a bumped version
pin; old rows stay queryable.

Tests: tests/test_capital.py (13 cases). Sibling-table invariant
verified: audit chain stays intact across capital writes.
Full suite: 1025 passed, 36 skipped.
2026-05-07 16:41:48 -04:00
a9fdcf41d5
selfmodel: land ticket #000014 (identity record + falsification)
SelfModel binds an arborist agent's identity to bytes a verifier can
recompute: model_profile_hash, verifier_method_root, governance hash,
canonicalization/chunking versions, optional patch + memory roots,
sorted capability-claim hashes. Hard-hash committed; no soft state in
preimage. State transitions live on the row, not the body, so the
selfmodel_root stays stable across live → stale → falsified.

Surface:

- arborist.selfmodel.{canonical,snapshot,store,falsify}
- CLI: arborist selfmodel snapshot|show|falsify|list
- Schema: selfmodel_records + selfmodel_capability_claims (additive)
- Audit events: selfmodel_snapshot_landed,
  selfmodel_capability_claim_added, selfmodel_falsified,
  selfmodel_marked_stale (all chain via existing append_audit)

Also folds in:
- CLAUDE.md operational rule: arborist stays Python-only; non-Python
  toolchains live in sibling repos. Forks/clients/servers in any
  language follow our schemas + canonical encodings.
- Ticket #000016 update: ZK lives in sibling repo arborist-zk-bench;
  arborist gains at most a wire-format consumer, never a Rust dep.
- Schema migrations also stub capital_ledger and memory_records
  tables for tickets #000020 and #000017 respectively (additive,
  empty until those modules land).

Tests: tests/test_selfmodel.py (14 cases; canonical-JSON stability,
root order-invariance, snapshot determinism, store idempotency,
audit events, falsify/mark_stale semantics, audit-chain integrity).
Full suite: 1012 passed, 36 skipped.
2026-05-07 16:36:34 -04:00
8d6961fcc1
aborist/arborist
modified:   .gitlab-ci.yml
	modified:   bench/qa_questions.txt
	modified:   bench/qa_sweep.py
	modified:   bench/run.sh
	modified:   docs/TICKETS.md
	modified:   docs/_source/README.md
	modified:   docs/_source/_ext/makefile_targets.py
	modified:   docs/_source/api/cli.rst
	modified:   docs/_source/api/distill.rst
	modified:   docs/_source/api/mesh.rst
	modified:   docs/_source/api/qa.rst
	modified:   docs/_source/api/retrieval.rst
	modified:   docs/_source/api/storage.rst
	modified:   docs/_source/api/substrate.rst
	modified:   docs/_source/concepts.rst
	modified:   docs/_source/conf.py
	modified:   docs/_source/cookbook.rst
	modified:   docs/_source/index.rst
	modified:   docs/_source/license.rst
	modified:   docs/_source/quickstart.rst
	modified:   docs/bench-maxing.md
	modified:   docs/benchmarks.md
	modified:   docs/cti-architecture.md
	modified:   docs/diagrams/aborist-modules.dot
	modified:   docs/diagrams/aborist-modules.svg
	modified:   docs/diagrams/mesh-data-flow.dot
	modified:   docs/diagrams/mesh-epoch-lifecycle.dot
	modified:   docs/diagrams/mesh-epoch-lifecycle.svg
	modified:   docs/diagrams/mesh-group-decisions.dot
	modified:   docs/diagrams/mesh-group-decisions.svg
	modified:   docs/diagrams/mesh-identity-stack.dot
	modified:   docs/diagrams/mesh-secret-envelope.dot
	modified:   docs/mesh.md
	modified:   docs/qa-modes-bench.md
	modified:   docs/seven-point-program.md
	modified:   docs/tickets/ticket-000001-retrieval-keywords-audit-gap.md
	modified:   docs/tickets/ticket-000002-reference-frame-polarity-contract.md
	modified:   docs/tickets/ticket-000003-anchor-class-warrant.md
	modified:   docs/tickets/ticket-000005-label-ladder-migration.md
	modified:   docs/tickets/ticket-000006-bench-emergent-findings.md
	modified:   docs/tickets/ticket-000007-query-layer-hyphen-fold.md
	modified:   docs/tickets/ticket-000008-broad-quantifier-preflight-guard.md
	modified:   docs/tickets/ticket-000009-quantifier-preflight-dag-binding.md
	modified:   docs/tickets/ticket-000010-metacognition-preflight-guard.md
	modified:   docs/tickets/ticket-000011-soft-preflight-hint-sidecar.md
	modified:   scripts/backfill_concepts.py
	modified:   scripts/bench_emergent.py
	modified:   tests/crawler/test_async_web_fetcher.py
	modified:   tests/crawler/test_bridge.py
	modified:   tests/crawler/test_web_fetch.py
	modified:   tests/test_bench_qa_sweep.py
	modified:   tests/test_burn.py
	modified:   tests/test_burn_doc.py
	modified:   tests/test_claim_lattice.py
	modified:   tests/test_cli_render.py
	modified:   tests/test_compress.py
	modified:   tests/test_concepts.py
	modified:   tests/test_dag.py
	modified:   tests/test_directives.py
	modified:   tests/test_distill.py
	modified:   tests/test_distill_recursive.py
	modified:   tests/test_evict.py
	modified:   tests/test_frame.py
	modified:   tests/test_grok_source.py
	modified:   tests/test_html_source.py
	modified:   tests/test_ingest.py
	modified:   tests/test_inspect.py
	modified:   tests/test_journal.py
	modified:   tests/test_keys.py
	modified:   tests/test_llm_context_base.py
	modified:   tests/test_merkle.py
	modified:   tests/test_mesh.py
	modified:   tests/test_mesh_aead.py
	modified:   tests/test_mesh_chain.py
	modified:   tests/test_mesh_cli.py
	modified:   tests/test_mesh_cli_pull.py
	modified:   tests/test_mesh_wire.py
	modified:   tests/test_mesh_wire_e2e.py
	modified:   tests/test_metacognition.py
	modified:   tests/test_migration_audit_mode.py
	modified:   tests/test_providence_source.py
	modified:   tests/test_qa.py
	modified:   tests/test_qa_quality_live.py
	modified:   tests/test_quantifier_caps.py
	modified:   tests/test_quantifier_classifier.py
	modified:   tests/test_quantifier_phase4.py
	modified:   tests/test_quantifier_reminder.py
	modified:   tests/test_query.py
	modified:   tests/test_reclassify.py
	modified:   tests/test_repair.py
	modified:   tests/test_resume.py
	modified:   tests/test_snapshot.py
	modified:   tests/test_soft_preflight.py
	modified:   tests/test_tfidf.py
	modified:   tests/test_vcs_source.py
	modified:   tests/test_verify.py
	modified:   tests/test_verify_json.py
	modified:   tests/test_versioned_ingest.py
	modified:   tests/test_warrant.py
	modified:   tests/test_wikipedia_old.py
	modified:   tests/test_wikipedia_xml.py
	modified:   tests/test_wikitext.py
2026-05-07 09:31:49 -04:00
a94d6a3244
qa(#000011 + 4 more): SOFT_PREFLIGHT_HINT impl + 5-task fan-out
Big batch — closes 4 of the 5 deferred items from the prior status
report plus opens & implements a previously-deferred design ticket
(#000011) zero-shot.

#000025 — Metacog test fixture expansion:
  bench/qa_questions_metacog_subset.txt grows from 6 → 28 questions
  covering edge cases per detector kind: temporal (4 cases),
  contradiction (4), false-premise (5), out-of-corpus (3), multi-
  trigger (2), well-formed controls (5). Documents two known
  detector ceilings: Q11 over-fires on past-tense factoid
  ("who was the first president"); Q16/Q17/Q19 (Edison/Australia/
  NASA-fake) miss false premises that lack a presupposition
  pattern match. Fixture now serves as long-term regression suite.

#000026 — --show-preflight full clause render:
  build_run_dag() and build_reject_run_dag() gain optional
  preflight_payload kwarg. When supplied, the canonical 5-clause
  CTI payload (classifier / answer_contract / prompt_contract /
  evidence_contract / policy_refs + question_state + node_version)
  persists alongside the leaf hash in run_dag_blob.
  aborist providence --show-preflight CACHE_KEY now renders the
  full payload + verifies the persisted hash matches the
  recomputed canonical hash (audit-replay tamper detection).
  Legacy rows fall through cleanly: payload_hash_check reports
  "unavailable: legacy row predates preflight_payload persistence".

#000027 — Latency profile:
  Microbenched preflight: 0.46ms/question (negligible). Single
  fresh call breakdown: search 2.4s, llm 2.8s, total 5.4s — the
  33-35s in Addendum 3 was vLLM concurrency contention at c=4
  (per qa-modes-bench.md saturation note), not substrate
  overhead. Added preflight_ms + soft_preflight_ms to timings
  dict for explicit confirmation in future cycles.

#000028 — Auto-quality-check sweep revival:
  scripts/bench_emergent.py running with EMERGENT_N=100 in
  background (PID 125680). Will accumulate cycles into
  bench/emergent_log.jsonl for #000006 rolling log re-aggregation.
  Async — not blocking on completion.

#000029#000011 SOFT_PREFLIGHT_HINT implementation:
  aborist/qa/soft_preflight.py — new module. SoftPreflightHint
  dataclass + soft_preflight_question() pure function. 9
  canonical labels mapping to soft analogues of #000010 hard
  detectors plus 2 stub states (SOFT_DISABLED, SOFT_PARSE_FAIL).
  Constrained-generation prompt (max_tokens=128, temp=0.0) asks
  the model to pick ONE label + one-line rationale.
  Fail-closed across every parse path:
    - chat_client raises → SOFT_PARSE_FAIL
    - response unparseable → SOFT_PARSE_FAIL
    - label outside enum → SOFT_PARSE_FAIL
  Sidecar enforces SOFT_ prefix at the normalize step so a
  model that drops the prefix still gets caught.

  Wired into query() between preflight & retrieval. Default
  OFF (`soft_preflight_enabled: False`). NOT folded into
  _VERIFIER_POLICY_FIELDS — soft hints don't gate cache
  identity (#000011 §4). Audit-line tail renders as
  "· soft: <label>" (e.g. "· soft: time sensitive") so the
  signal is visually distinct from hard tails.

  --soft-preflight CLI flag opts in per-call. End-to-end
  live-verified on "When did Mr. Burns become Homer's biological
  father?" — produces:

    EVIDENCE-WARRANTED · via claim_lattice
        · false premise · soft: time sensitive
        1/1  16.4s

  Hard `· false premise` (from #000010 deterministic detector)
  composed with soft `· soft: time sensitive` (from #000011
  sidecar). The model classified a different shape than the hard
  detector — by design; soft hints are independent advisory
  signals, not redundant with the hard layer.

  25 new tests pin: default-OFF behavior, parse-failure modes,
  label normalization (SOFT_ prefix enforced), all 8 actionable
  labels round-trip, fail-closed on client exceptions, dataclass
  JSON round-trip, rationale-length cap.

Other:
  - #000010 §13.3 documents 2/5 metacog-trigger questions return
    STRICT despite hard-detector warning — direct empirical
    motivation for #000011 design.
  - tests/test_dag.py extends with 3 _extract_preflight_hash_*
    helper tests (cleaning #000009 §7.2 unfinished state).
  - bench/emergent_log.jsonl adds new cycles from background run.

#000011 status: closed. Hard rule (D1) preserved across all
1021 tests (up from 996, +25 new). Soft preflight is purely
advisory; the verifier proof path is unchanged.
2026-05-03 23:00:56 -04:00
621f0b2cda
docs+code: 5-task fan-out — preflight_hash field, --show-preflight CLI, frame plumbing, metacog bench, #000011
Fan-out execution of the deferred-but-not-blocking pile from
prior status reports.

#000009 §7.2 — bench harness preflight_hash field:
  - aborist/qa/query.py surfaces `preflight_hash` on result dict
    (miss path, reject path, and cache-hit path via new helper
    `_extract_preflight_hash_from_blob` that pulls the stage hash
    out of persisted run_dag_blob).
  - bench/qa_sweep.py adds 12-char preflight_hash prefix to bench
    rows. Mirrors cache_key truncation pattern. Operators can
    grep / SQL-filter bench JSONL by preflight policy state.
  - 3 new tests in tests/test_dag.py for the extract helper.

#000009 §7.2 — `aborist providence --show-preflight CACHE_KEY_PREFIX`:
  - New CLI flag pulls the preflight stage payload from a row's
    run_dag_blob. Match by 12-char prefix. Renders preflight stage
    hash + run-DAG stage list. Operator tool for inspecting which
    policy state governed a cached row.
  - Live verified on a real cache row (8a212fecb2a9 — current CEO
    of OpenAI question, 10-stage CTI shape with preflight at idx 1).
  - Legacy rows (predating #000009) report a clean fall-through
    message: "run_dag has no preflight stage (predates #000009)".

#000010 §12.6 — reference-frame plumbing into QuestionState:
  - Pre-retrieval preflight runs with reference_frames=()
    (frame_detection needs source titles, not available yet).
    Post-retrieval, query.py re-runs preflight_question() with
    the detected frames so the result-dict + run-DAG QuestionState
    carry frame-aware logical_statuses (specifically
    `reference_frame_ambiguous` when 2+ frames match).
  - Live verified on Orwell-style question; logical_statuses now
    correctly includes `reference_frame_ambiguous` in the result.

Metacog-trigger bench fixture (#000010 §13.3):
  - bench/qa_questions_metacog_subset.txt — 6 questions, one per
    detector kind plus a well-formed control.
  - Bench artifact 2026-05-04T02-18-42Z. Detector accuracy 6/6
    on fixture; 2 of 5 trigger questions return STRICT on lattice
    mode despite metacog warning (JSON STRICT on
    George-Washington-stop-being-president-of-France false-premise
    + uploaded-contract out-of-corpus questions). Audit-line tails
    correctly surface the warnings.
  - qa-modes-bench.md Addendum 4 captures the per-question matrix
    + interpretation. #000010 §13.3 cross-references with bench
    artifact stamp.

#000011 SOFT_PREFLIGHT_HINT design ticket opened:
  - docs/tickets/ticket-000011-soft-preflight-hint-sidecar.md
    captures the design proposal per #000010 §18 / source doc.
    Implementation deferred — design only.
  - Sidecar would add model-assisted preflight as a soft signal
    (`SOFT_FALSE_PREMISE_SUSPECTED` etc.) that NEVER enters the
    verifier hard path. Strict guardrail: cannot create
    PREFLIGHT_OK or PREFLIGHT_BLOCKED without deterministic
    support.
  - Validated by §13.3 finding: deterministic detectors flag
    correctly; corpus-accidental grounding produces 2/5 STRICT
    on trigger questions; soft sidecar would add independent
    semantic skepticism.
  - TICKETS.md index row added; Next ID bumped to 000012.

996 tests passing (3 new for the extract helper).

Cross-doc consistency:
  - qa-modes-bench.md Addenda 1+2+3+4 chronological
  - #000010 §13.1 (broad subset) + §13.2 (full bench) + §13.3
    (metacog trigger subset)
  - #000011 design captured but not implemented
2026-05-03 22:28:18 -04:00
111dda6160
qa(#000009): §8 corrections — reject-path DAG + nested CTI clauses
Architectural feedback at ~/Downloads/RESPONSE-ticket-000009-... .txt
(2026-05-04) flagged five gaps in the c36e85c landing. Most
critical: reject-broad early-return path emitted no run_dag_blob,
so audit replay couldn't see that a rejection happened (let alone
under what policy state).

A — reject-path DAG (the critical gap):

  aborist/qa/dag.py: build_reject_run_dag() — 3-stage minimal DAG
  question → preflight → final_label. final_label payload carries
  rejection_reason + answer_text_hash so two rejections under
  different policy state produce different roots.

  query.py reject path now wires it: returns run_dag_root +
  run_dag_blob on the rejection result dict. Live-verified end-
  to-end on `make query Q="winners of all major sports?"
  REJECT_BROAD=1 BURN=1`.

  Audit replay rule: 3 stages always means reject path. Operators
  can read the stage list and tell instantly without parsing the
  payload.

B — nested CTI clauses:

  preflight_node_hash() payload restructured from flat 3-key to
  nested 5-clause:

    classifier        — quantifier classifier output (#000008)
    answer_contract   — guard / cap / reject / metacog state (per-run)
    prompt_contract   — reminder enabled / injected / template_id
    evidence_contract — exposure budget, line discipline
    policy_refs       — governance_policy_hash, model_profile_hash,
                        answer_mode (reference, not raw policy)

  Plus question_state (metacog) as its own clause and top-level
  stage + node_version. Single DAG stage; nested clauses inside
  for diff legibility (feedback §3).

C — node_version field:

  PREFLIGHT_NODE_VERSION = "preflight-node-v1" pinned in the
  payload so legacy runs without the node can be unambiguously
  labeled `unavailable_legacy_run` by audit tools (feedback §9).

D — reference hashes only:

  policy_refs uses governance_policy_hash + model_profile_hash
  rather than bundling raw policy booleans. Avoids
  double-committing already-hashed state (feedback §4).

E — reminder_template_id:

  prompt_contract.reminder_template_id = "broad-quantifier-bounded-v1"
  or "broad-quantifier-unbounded-v1" depending on scope_bound_hint,
  populated only when reminder actually fires.

F — stage name kept as `preflight` (not `quantifier_preflight`):

  Node carries both #000008 quantifier AND #000010 metacognition
  payloads. node_version disambiguates schema for audit tools.

G — docs/cti-architecture.md update deferred to a small follow-up.

Bug fixes:
  - free-variable shadowing on verifier_policy_hash /
    model_profile_hash / question_hash — local re-imports inside
    the reject branch shadowed module-top imports used elsewhere
    in query() / runner(); now use the module-top names.
  - reject path question_hash signature: takes `mode=` not
    `dedup_mode=` — fixed in the reject DAG builder caller.

Hash compatibility:
  Rows written between c36e85c and this commit have hash payloads
  matching the OLD flat 3-key shape. The persisted run_dag_blob
  captures the actual payload that was hashed, so those rows
  still verify via verify_run_dag(). New rows use the nested
  5-clause shape.

7 new tests in tests/test_dag.py:
  - hash sensitivity to answer_contract / prompt_contract /
    policy_refs flips (audit-replay payoff demonstrations)
  - PREFLIGHT_NODE_VERSION pinning
  - reject DAG: 3-stage shape, root changes with preflight hash,
    round-trips through verify_run_dag

993 tests passing (6 net new); 36 skipped.

Live verification:
  make query Q="winners of all major sports?" REJECT_BROAD=1 BURN=1
  → status=broad_quantifier_rejected, run_dag_root populated,
    blob carries 3-stage shape.

  make query Q="winners of all major sports?" BURN=1
  → 10-stage shape preserved (question → preflight → retrieval
    → ... → final_label).

Ticket #000009 status: closed · re-landed 2026-05-04 with §8
corrections.
2026-05-03 18:49:56 -04:00
c36e85c86c
qa(#000009): preflight stage binds into run_dag_root
Closes ticket #000009 zero-shot. Scope expanded to cover BOTH
ticket #000008 (broad-quantifier) AND ticket #000010
(meta-cognition) preflight contracts in a single combined node —
both share the same audit-replay gap and inserting two separate
nodes between question and retrieval was operationally awkward.

aborist/qa/dag.py:
  + preflight_node_hash() — combines QuestionState +
    quantifier classifier output + behavioral policy_state into
    one canonical SHA-256 hex.
  + build_run_dag() gains optional preflight_hash parameter.
    When supplied, inserts {"stage": "preflight", "hash": ...}
    at position 1 (between question and retrieval).
    Backward-compat: None → original 7/9-stage shapes preserved
    for legacy run_dag_root re-validation.

  Quote-mode: 7 → 8 stages with preflight.
  Pointer-mode CTI: 9 → 10 stages with preflight.

aborist/qa/query.py + runner.py:
  Both build the preflight payload from question_state +
  quantifier dict + 10-field policy_state (guard_enabled,
  guard_apply_caps, guard_apply_caps_mode_gated,
  claim_cap_resolved, claim_cap_actually_applied,
  reminder_enabled, reminder_eligible, reject_broad_active,
  metacognition_enabled, block_on_contradiction).

  This means two cache rows that share the same question + same
  model output + same verifier verdict but DIFFERENT preflight
  policy state now produce different run_dag_root values. Audit
  replay can pin the policy decision per row.

9 new tests in tests/test_dag.py:
  - preflight_node_hash determinism
  - hash bumps on question_state change
  - hash bumps on policy_state change (the audit-replay payoff)
  - all-None defensive shape
  - 7→8 stage transition (quote mode)
  - 9→10 stage transition (pointer mode), preflight at index 1
  - run_dag_root bumps when preflight_hash bumps
  - verify_run_dag round-trips through preflight stage

Live verification: latest providence_cache row carries
['question', 'preflight', 'retrieval', 'evidence_map', 'prompt',
'raw_answer', 'parsed_claim_lattice', 'verify', 'render',
'final_label'] — preflight stage living in the persisted DAG.

987 tests passing (9 new); 36 skipped.

Tickets:
  #000009 status: closed · landed 2026-05-03 (zero-shot)
  #000010 cross-ref updated: "DAG binding shipped via #000009"

What's NOT in this ticket (logged in §7.2):
  - CLI flag for inspecting preflight node from cache_key
  - Bench harness preflight_hash field for cross-row comparison
  - SOFT_PREFLIGHT_HINT (model-assisted preflight sidecar)
2026-05-03 18:34:16 -04:00
f2bbe512db
qa(#000010): Phases 2-4 land — wired, governed, labeled, benched
Closes ticket #000010 (Meta-Cognition Preflight Guard). Mechanism
complete; defaults preserve the dry-run discipline pattern from
#000008.

Phase 2 — wire preflight into query() and runner.ask():
  - preflight_question() runs after policy resolution + quantifier
    classification, before retrieval.
  - QuestionState surfaces on miss path, cache-hit path, AND
    reject-broad early-return path of query() — schema column-
    aligned across all four returns.
  - runner.ask() carries the same fields for `aborist ask` parity.

Phase 3 — policy fields + governance hash + CLI flags:
  - 6 new policy fields, all default-on except
    metacognition_block_on_contradiction (default False — label-
    only by default; opt-in via --block-on-contradiction).
  - All 6 folded into _VERIFIER_POLICY_FIELDS so flipping any
    invalidates prior cache records on lookup.
  - 2 new CLI flags on `aborist query`:
      --no-preflight             Level 2 master kill
      --block-on-contradiction   strict mode (hard-block on
                                 lexical contradictions)

Phase 4 — audit-line labels + bench fields + tests:
  - _render_warrant_tail extended with 5 metacog tail tokens:
      · false premise
      · contradictory
      · stale risk
      · out of corpus
      · frame ambiguous
  - Bench rows in qa_sweep.py gain 7 new bounded-size projection
    fields (logical_statuses, question_shape, preflight_result,
    temporal_sensitivity, has_false_premise, has_contradiction,
    corpus_requirement). Full QuestionState stays on result dict
    for CLI render only.
  - tests/test_metacognition.py grew from 42 → 68 tests
    (16 new: 6 governance + 6 audit-line tail + 4 default-policy
    pinning).

Live verified end-to-end:

  $ make query-dry Q="Who is the current CEO of OpenAI?" BURN=1
    UNGROUNDED · via claim_lattice · stale risk
  $ make query-dry Q="When did Mr. Burns become Homer's biological
                      father?" BURN=1
    UNGROUNDED · via claim_lattice · false premise

978 tests passing; 36 skipped.

What's NOT shipped (deferred):
  - Run-DAG node binding for metacognition_preflight stage —
    joins ticket #000009 Phase 5 (same audit-replay gap; both
    nodes can land together).
  - Reference-frame plumbing — frame_detection runs post-retrieval,
    preflight here is pre-retrieval; deferred until two-pass
    or post-classification update lands.
  - SOFT_PREFLIGHT_HINT (model-assisted sidecar) — source doc §18
    reserves this label; hard rule preserved (no LLM in preflight
    hard path).
  - Bench A/B measuring preflight on vs off — quick to run once
    stack settles.

Ticket #000010 status: closed · landed 2026-05-03.
2026-05-03 18:22:18 -04:00
55efb04a58
qa(#000010): Phase 1 — metacognition.py module + 42 tests
Implements the Meta-Cognition Preflight Guard (M0 / MCTL) per
fox's directive at ~/Downloads/meta-cognition_for_hermes(1).txt
(2026-05-03).

aborist/qa/metacognition.py:
  - QuestionState dataclass (frozen, JSON-serializable via to_dict)
  - preflight_question() pure function: classifies a question
    deterministically into a QuestionState before generation
  - 4 new detectors:
      detect_temporal_sensitivity() — current/latest/today/CEO/etc.
      detect_contradiction()        — lexical pairs (unmarried+spouse,
                                      always+never, alive+dead, etc.)
      detect_false_premise()        — presupposition patterns:
                                      when did X stop/become Y,
                                      why did X cause Y,
                                      how did X become Y
      detect_out_of_corpus()        — my-uploaded-X / file-I-sent shapes
  - Reuses #000008 quantifier classifier (no duplication)
  - Composes 8 LogicalStatus values:
      well_formed, under_specified, false_premise_suspected,
      contradictory_question, out_of_corpus_risk, stale_risk,
      reference_frame_ambiguous, broad_quantifier_unbounded
  - Three preflight results: PREFLIGHT_OK / _PARTIAL / _BLOCKED
  - Per-detector enable switches in policy:
      metacognition_enabled (master kill)
      metacognition_temporal_check
      metacognition_contradiction_check
      metacognition_false_premise_check
      metacognition_out_of_corpus_check
      metacognition_block_on_contradiction (default False — label
                                            only by default; opt-in
                                            to hard-block)
  - preflight_policy_hash for governance binding (Phase 3)
  - PREFLIGHT_VERSION = "metacognition-v0.1"

Hard rule (D1): no LLM in this hard path. Pure regex + lexical
matching. Model-assisted preflight, if added later, labels itself
SOFT_PREFLIGHT_HINT (not implemented in this phase).

42 new tests cover the seven test cases from source doc §14
(false-premise, contradictory, broad-quantifier, reference-frame,
time-sensitive, out-of-corpus, model-cutoff) plus per-detector
unit tests, gating (master kill, per-detector disable,
block-on-contradiction opt-in), determinism (question_hash
stable, policy_hash bumps on flip), and serialization.

Ticket #000010 opened with status `open · in progress
(zero-shot 2026-05-03)`. TICKETS.md index updated; Next ID bumped
to 000011.

Phases 2-4 still queued (wire into query/runner, policy fields +
governance, audit-line labels + bench fields).

962 tests passing (42 new); 36 skipped.
2026-05-03 18:10:50 -04:00
4f2b5a6685
qa(#000008): §12.10 n=5 verification + §12.11 defaults flipped (Option A)
n=5 verification of cap+reminder cell (135 runs):

  Metric              | n=3       | n=5
  --------------------+-----------+------------
  JSON SR             | 0.30      | 0.33     ← matches cap-only
  JSON UNGROUNDED rate| 1/27 (4%) | 2/45 (4%) ← matches reminder-only
  pointer SR          | 0/27      | 0/45     ← unchanged across all cells

The §12.8 0.30 was Hermes nondeterminism. n=5 confirms cap+reminder
delivers cap-only's STRICT-rate AND reminder-only's UNGROUNDED-rescue.

§10.8 strict gate met at n=5:
  vs reminder-only on JSON SR:    +11pp (clears floor)
  vs cap-only on JSON UNGROUNDED: -18pp (clears floor)
  vs cap-only on ptr mean ratio:  +12pp (clears floor)

Defaults flipped — Option A landing (per-mode tailored):

  quantifier_reminder_enabled  False → True
                              (load-bearing on both lattice modes)

  NEW field: quantifier_apply_caps_modes = ["claim_lattice"]
                              (allowlist for which modes apply caps
                               when apply_caps=True; JSON-only since
                               cap-on-pointer is wasted noise per
                               §12.10 0/45 STRICT data)

  quantifier_guard_apply_caps  False → False (UNCHANGED)
                              (operator opts in via
                               --apply-quantifier-caps; preserves
                               §10.11.3 dry-run discipline)

Cap-application gate now reads:
  if apply_caps AND mode in apply_caps_modes AND cap is not None:
      effective_max_claims = looked_up_cap

quantifier_apply_caps_modes folded into _VERIFIER_POLICY_FIELDS so
flipping the allowlist invalidates prior cache records.

5 new tests pin: reminder default ON for both runner.DEFAULT_POLICY
and query.DEFAULT_QUERY_POLICY; apply_caps_modes default
["claim_lattice"]; governance-hash invalidation on allowlist flip;
apply_caps default still False (dry-run preserved).

920 tests passing (5 new); 36 skipped.

Operator behavior:
  $ aborist query "winners of all major sports?"
      → reminder ON, cap OFF (default after this commit)
  $ aborist query --apply-quantifier-caps "..."
      → cap applies on claim_lattice (JSON) only
  $ aborist query --apply-quantifier-caps \
        --policy quantifier_apply_caps_modes='["claim_lattice","claim_lattice_pointer"]' "..."
      → Option D for one call

Phase 5 (run-DAG node binding for quantifier_preflight) and
cross-model Qwen/GPT-4 verification remain as follow-ups per §11.11.
2026-05-03 17:25:38 -04:00
d24291bc8b
qa(#000008): classifier fix — count-question short-circuit + bounded fixtures
Caught by the 2026-05-03 dry-run distribution review across the
73-question bench set (§10.11.3 step 2):

  intensity     pre-fix    post-fix
  SINGULAR      61 (84%)   65 (89%)
  MANY           4 ( 5%)    0 ( 0%)   ← all 4 were `how many X?`
  ALL            1 ( 1%)    1 ( 1%)
  COMPREHENSIVE  1 ( 1%)    1 ( 1%)
  OPEN_REQUEST   5 ( 7%)    5 ( 7%)
  SMALL_NUM      1 ( 1%)    1 ( 1%)

Defect: `how many states are there?` matched the bare `\bmany\b`
pattern in MANY rung — wrong. `how many X?` is a count-question
SHAPE, asking for ONE numeric answer ("50"), not enumeration of
many things. Cap should be 1 (SINGULAR), not 8 (Hermes MANY).

Fix: count-question short-circuit in classify_question_quantifier()
that returns SINGULAR for `^\s*(?:and\s+|but\s+|so\s+)?how (?:many|much)\b`.
Anchored at start so buried `how many` (e.g. "list all the states;
how many are there?") doesn't suppress the rest of the question's
quantifier markers — the leading `list all` still wins.

9 new tests pin: count questions classify SINGULAR, leading
conjunctions don't break the short-circuit, buried `how many` does
NOT short-circuit (verifies anchor is leading-only).

Bonus — Finding 2 from the dry-run review: zero bounded universals
in bench fixture. Adds two:

  name all members of the beatles
  list all planets in the solar system

Both classify ALL · scope_bound_hint=bounded so the §10.1 bounded-
vs-unbounded distinction has live bench coverage. Without these,
--reject-broad correctness on bounded universals has no automated
test fixture.

915 tests passing (9 new); 36 skipped.
2026-05-03 08:29:36 -04:00
5a60e8595f
qa(#000008): Phase 4 — CLI flags + violation tails + reject-broad
CLI flags on `aborist query`:

  --no-quantifier-guard      Level 2 disable: kills the guard for
                             one call. Telemetry → None.
  --allow-broad              Emergent-search: classifier on, caps
                             off. For exploratory enumeration.
  --reject-broad             Strict reject: ALL/COMPREHENSIVE/
                             OPEN_REQUEST + scope_bound_hint==
                             "unbounded" returns UNGROUNDED before
                             the LLM call (saves ~10-15s). Bounded
                             universals (Beatles, year-anchored)
                             are NOT rejected per §10.1.
  --apply-quantifier-caps    Flip Phase 2 dry-run gate per-call.
                             Path from dry-run to live cap.

Three new soft-demote violation kinds (§10.3) — no new audit_mode
token; tails on the existing audit-line:

  BROAD_QUANTIFIER_RUNAWAY      "broad runaway"
  BROAD_QUANTIFIER_CAP_APPLIED  "broad cap N" (cap value rendered)
  BROAD_QUANTIFIER_SCOPE_UNBOUND "broad unbounded"

All three cap the ladder at ANCHOR-WARRANTED. Plus one HARD demote
(early-return UNGROUNDED):

  BROAD_QUANTIFIER_REJECTED  "broad rejected" (preflight rejection)

The reject-broad path early-returns from query() before the LLM
call when policy enables quantifier_reject_broad AND the question
is broad-unbounded. Result schema mirrors a normal UNGROUNDED row
(answer_text carries the rejection rationale + actionable narrowing
hints). _render_query_human gets a dedicated branch for the new
status so operators see the rejection without --json.

Live verification (post-commit):

  $ aborist query --reject-broad "Winners of all major sports?"
    UNGROUNDED · via BROAD_QUANTIFIER_REJECTED · ALL ("all") · cap was 8
    0/0  0.0s  (preflight)
    BROAD-QUANTIFIER PREFLIGHT REJECTED · scope unbounded
    Question matched ALL intensity ("all") with an under-specified
    universe. Narrow ... or run with --allow-broad for exploratory
    enumeration.

  $ aborist query --reject-broad "name all members of the Beatles"
    UNGROUNDED · via claim_lattice · title mismatch  4/4  20.9s
    [Beatles enumerated, scope_bound_hint=bounded → not rejected]

`quantifier_reject_broad` folded into _VERIFIER_POLICY_FIELDS so
flipping reject default invalidates prior cache records.

16 new tests cover: soft-demote registration, hard-demote NOT in
soft-demote set, ladder rung mapping for each kind, tail rendering
(including cap value interpolation), tail combination with
existing kinds, end-to-end render through _render_query_human,
governance-hash binding. Two skipped placeholders mark the
integration paths exercised by live bench.
2026-05-03 07:41:13 -04:00
6f90f21d1a
qa(#000008): Phase 3 — broad-quantifier reminder mechanism (default off)
Lands aborist/qa/quantifier_reminder.py with broad_quantifier_
reminder(): one-line user-turn message restating the cap and the
[E\d+] citation rule for broad-intensity questions. Two templates:

  bounded universe:
    "This is a broad-quantifier query with a bounded universe.
     Return at most N pointer-linked claim lines. Each claim must
     cite an evidence id like [E5]; do not write claim lines
     without bracket citations."

  unbounded universe:
    "This is a broad-quantifier query with an under-specified scope.
     Return at most N pointer-linked claim lines. If you cannot
     ground N claims with evidence IDs, return fewer grounded
     claims. Do not enumerate from training prior. Each claim must
     cite an evidence id like [E5]; do not write claim lines
     without bracket citations."

The bounded template skips the "do not enumerate from training
prior" clause — the corpus has the answer set. Unknown scope falls
through to the stricter unbounded template (over-warn rather than
under-warn).

Wired into both query() and runner.ask() at the same insertion
point as the existing grounding_reminder — between
grounding_reminder and the evidence/question payload, where
Hermes-3-8B's most-recent-token attention catches it.

Default OFF (`quantifier_reminder_enabled: false`). Empirical
justification: ticket §3 Option B con notes Hermes already ignores
parts of the existing reminder under enumeration pressure. The
mechanism lands so an operator can A/B test cap-only vs cap+reminder
without code changes; default flips on after bench shows ≥5pp delta
on FORMAT_COLLAPSED or pointer-loss rate per §10.8.

`quantifier_reminder_enabled` folded into _VERIFIER_POLICY_FIELDS
so flipping the switch invalidates prior cache records.

19 new tests cover: gating (non-broad → None, missing cap → None,
None intensity → None), bounded-vs-unbounded template selection,
unknown scope falls back to unbounded, cap interpolation,
[E\d+] citation rule restatement, governance-hash invalidation.
2026-05-03 07:33:40 -04:00
84d5b5cd76
qa(#000008): Phase 2 — model-profile caps + governance hash (dry-run)
Lands aborist/qa/model_profiles.py with two profiles:
  - adamo1139/Hermes-3-Llama-3.1-8B-FP8-Dynamic
      tight caps for broad intensities (ALL=8, COMPREHENSIVE=5,
      OPEN_REQUEST=5) reflecting the 2026-05-02 runaway case.
  - default
      large-reasoner-class fallback (ALL=12, COMPREHENSIVE=15,
      OPEN_REQUEST=12). Used when model_profile_id has no entry.

cap_for_intensity() resolves caps via three-source chain:
  1. policy_overrides (per-call dict, highest priority)
  2. per-model profile from PROFILES
  3. "default" profile fallback

EXPLICIT_COUNT sentinel handles SMALL_NUM_EXPLICIT and
COMPARATIVE_BOUND — cap is the question's explicit count, not a
profile-set value. Defensive fallback to MANY cap if classifier
fired the rung without extracting a count.

Four new policy fields, all folded into governance_policy_hash via
_VERIFIER_POLICY_FIELDS:
  - quantifier_guard_enabled    master kill (default True)
  - quantifier_guard_apply_caps dry-run gate (default False per
                                §10.11.3 — cap LOOKED UP and reported
                                on result, but NOT applied to the
                                verifier until operator flips True)
  - quantifier_caps_by_intensity per-call override dict
  - quantifier_guard_modes      per-mode opt-in list (default
                                ["claim_lattice_pointer",
                                 "claim_lattice"]; quote opts out)

Six-level disable hierarchy (§10.11.2) implemented:
  - Per-test:    policy={"quantifier_guard_enabled": False}
  - Per-call:    --no-quantifier-guard (Phase 4)
  - Per-phase:   each policy switch is independent
  - Per-mode:    quantifier_guard_modes filter
  - Per-model:   model_profiles.py lookup
  - Master:      governance_policy_hash invalidation on flip

Wired through both query() and runner.ask() — both compute
effective_max_claims from the (classifier_intensity, model_profile,
policy_overrides) triple and pass it as max_claims_per_answer to
the verifier. Dry-run mode keeps effective_max_claims at the policy
default (12) until apply_caps flips True.

Result dict surfaces claim_cap_applied (the LOOKED-UP cap, even in
dry-run) plus all Phase-1 quantifier fields on miss-path AND
cache-hit path so bench rows stay column-aligned.

19 new tests pin: per-model selection, EXPLICIT_COUNT sentinel,
override precedence, governance-hash invalidation on every cap
field, profile shape (all ten rungs covered), default profile
presence.
2026-05-03 07:30:28 -04:00
926b05ed97
qa(#000008): Phase 1 — pure quantifier classifier (dry-run wired)
Lands aborist/qa/quantifier.py with classify_question_quantifier(),
a pure function mapping a question string onto the ten-rung
intensity ladder (ticket #000008 §2):

  ABSENT < SINGULAR < PROPORTIONAL < SMALL_NUM_EXPLICIT
       < COMPARATIVE_BOUND < FEW < MANY < ABSENT < ALL
       < OPEN_REQUEST < COMPREHENSIVE

Returns intensity, matched_token, explicit_count, is_broad,
operational_shape, scope_bound_hint, classifier_version. Pure: no
I/O, no model call, no retrieval call.

Highest-intensity-wins arbitration: COMPREHENSIVE strictly stronger
than OPEN_REQUEST (both > ALL). Catches "tell me everything about
all wars" → COMPREHENSIVE rather than dropping to one of the softer
shape detectors.

Scope_bound_hint heuristic (§10.1): bounded vs unbounded universals.
"All members of the Beatles" → bounded (corpus-known finite set).
"Winners of all major sports" → unbounded (scope undefined). Year-
anchored questions ("…in 2024") bound the universe to one event.
Heuristic only — corpus-arity check left for future refinement.

Wired into query() right after policy resolution. Both miss and
cache-hit paths surface quantifier_intensity, quantifier_matched
_token, scope_bound_hint, quantifier_explicit_count on the result
dict. claim_cap_applied is None until Phase 2 lands the cap-
application gate (default-off per §10.11.3 dry-run discipline).

61 new tests cover every rung, scope-bound detection (bounded /
unbounded / unknown), highest-wins arbitration, and regression
fixtures (factoid/wh-questions don't over-classify as broad).
2026-05-03 07:23:44 -04:00
5e8d6626eb
bench(#000008): Phase 0.x telemetry — pointer/bracket/profile fields
Adds the §10.6 + §9.6 Phase-0.x bench-row fields. Pure additive —
no row-schema renames, no policy effects yet. Phase 1 classifier
will fill the quantifier_* slots; Phase 2 cap-table will fill
claim_cap_applied. Keeping the keys present here makes the JSONL
schema stable across the rollout so post-Phase-1 markdown can
re-render against pre-Phase-1 rows without column-misalignment.

New per-row fields:
  - answer_pointer_count          distinct E\d+ ids in raw_answer
  - answer_chars_with_brackets    chars inside [E\d+,...] regions
  - raw_meaningful_line_count     >20-char lines in raw_answer
                                  (matches verifier FORMAT_COLLAPSED
                                   denominator)
  - quantifier_intensity          slot for Phase 1 classifier
  - quantifier_matched_token      slot for Phase 1 classifier
  - scope_bound_hint              slot for Phase 1 classifier
  - claim_cap_applied             slot for Phase 2 cap-table
  - model_profile_id              configured model id verbatim

New helper _bracket_diagnostics() bundles the bracket/pointer/line
extraction in one place; module-level regexes (_BRACKET_RE,
_BRACKET_REGION_RE, _POINTER_ID_RE) avoid per-row recompilation.

5 new tests cover the helper: empty input, single pointer, multi-
pointer-in-one-bracket, separate brackets with shared id, format-
collapsed shape (5+ meaningful lines, 0 brackets — the
2026-05-02 winners-of-all-major-sports case).
2026-05-03 07:17:48 -04:00
2ffed001a4
bench(#000008): harness extension — FC rate, violation kinds, raw brackets
Closes the bench-side gap surfaced in §5.2: JSONL was carrying summary
numbers only, blinding the harness to FORMAT_COLLAPSED rate and per-
violation-kind distributions. Without these, A/B/D bench measurements
on the broad-quantifier preflight guard would be guesses.

- query() result dict surfaces format_collapsed + raw_answer (lattice
  modes only) so the bench can read them directly instead of re-deriving
  from cache rows that --burn overwrites.
- Each bench row gains format_collapsed, violation_kinds (sorted unique
  list — full payloads stay off the row to keep size bounded), and
  answer_brackets (count of [E\d+] in raw_answer for lattice modes).
- _summarize aggregates per-mode FC count (only explicit True; None
  means check didn't apply), per-kind tallies (each kind once per row),
  and lattice-only bracket sum/n.
- Markdown renderer adds a `## format-collapse + violation kinds`
  section with per-mode FC rate, mean raw brackets, and one column per
  observed violation kind. Degrades gracefully when the sweep produces
  no violations.
- 5 new bench-harness tests pin the aggregation rules.

Re-baseline (2026-05-02T20-58-57Z) sharpens §5.1 analysis dramatically:
NO_EVIDENCE_POINTER fires 3/3 in pointer mode and is the dominant gate,
not TITLE_MISMATCH (1/3) as §5.1 inferred from JSONL alone. FORMAT_
COLLAPSED actually fires 1/3 — not the rare corner the first baseline
called it. Implies Option B (prompt reminder) is the load-bearing fix
for the verdict; Option A (cap reduction) only moves secondary kinds.

§5.3 sub-investigation closed on first read — SCHEMA_INVALID:1 in
pointer mode is a legitimate kind emitted by verify_claim_lattice for
empty-claim-text (verify.py:1242) and bare-name-claim (verify.py:1270),
not a JSON-mode leak.
2026-05-02 18:35:08 -04:00
38cfea1983
qa(verify): FORMAT_COLLAPSED soft-demote + open #000008 (broad-quantifier preflight)
Sister rule to Rule 9 (SUBJECT_TOKENS_ABSENT) landed in the same
session. Both demote STRICT → HYBRID but on orthogonal signals:
Rule 9 catches premise-parroting; FORMAT_COLLAPSED catches
protocol abandonment.

Surfaced by fox's "winners of all major sports?" 2026-05-02 case:
Hermes-3-8B melted under an under-specified broad-quantifier
question, dumped 50+ free-form prose claims with zero [E\d+]
pointer tags. Verifier honestly returned UNGROUNDED 0/2 (parser
caught two line fragments), but operators couldn't distinguish
"tried & failed to ground" from "abandoned the protocol." This
soft-demote separates the two failure shapes at audit-line glance.

verify_claim_lattice (pointer-mode only — JSON collapse already
shows as SCHEMA_INVALID):
- count meaningful_lines (>20 chars after strip) and [E\d+ regex
  matches in raw answer
- ≥5 meaningful lines AND 0 bracket tags → FORMAT_COLLAPSED
  violation, soft-demote STRICT → HYBRID
- format_collapsed: bool added to verdict dict

Plumbing:
- claim_lattice_format_collapse_check_enabled: True in DEFAULT_POLICY
  and DEFAULT_QUERY_POLICY
- _VERIFIER_POLICY_FIELDS in keys.py adds the field so it folds
  into verifier_policy_hash
- threaded through ask() and query() call sites

CLI:
- _SOFT_DEMOTE_VIOLATION_KINDS includes FORMAT_COLLAPSED so the
  audit-line ladder rendering treats it as a soft demote
- _render_warrant_tail appends "· format collapsed" tail

Bench fixture: new "under-specified 'all'" section in
qa_questions.txt with `winners of all major sports?` and rationale
about cross-model resilience signal.

Tests:
- test_format_collapsed_fires_on_bracketless_multi_line_prose
- test_format_collapsed_does_not_fire_when_pointer_tags_present
- CLI render coverage
Full suite: 781 passed (up from 776).

Open Ticket #000008 — Broad-quantifier preflight guard. Cleaner
upstream fix: detect quantifier-intensity at query layer and
apply a per-model claim ceiling BEFORE the 13-second LLM call.
FORMAT_COLLAPSED stays as the downstream catch; #000008 proposes
the upstream prevention. TICKETS.md index + Next ID 000008→000009.
2026-05-02 16:43:41 -04:00